RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OSGEPQ9NPF4 335 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 PCSK1NQ9UHG2 260 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 C1QTNF3-AMACRE9PGA6 284 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 PLRG1O43660 514 aaKnown RBP11.41□□□□□ -0.58
SMAD4-211ENST00000590499 BNIP3LO60238 219 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 GJB3O75712 270 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 CD27P26842 260 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 CCR5P51681 352 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 YBEYP58557 167 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-211ENST00000590499 TPI1P60174 286 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-211ENST00000590499 CNTN1Q12860 1018 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 GRIK2Q13002 908 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 SERINC3Q13530 473 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 DPYSQ14117 519 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 PARP15Q460N3 678 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 CCDC122Q5T0U0 273 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 PIP5KL1Q5T9C9 394 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 AFMIDQ63HM1 303 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 DPY19L3Q6ZPD9 716 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 ARRDC3Q96B67 414 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 HMCESQ96FZ2 354 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 BTBD6Q96KE9 485 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 CCDC114Q96M63 670 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 MIR1-1HGQ9H1L0 117 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 DHX35Q9H5Z1 703 aaKnown RBP11.41□□□□□ -0.58
SMAD4-211ENST00000590499 EBF2Q9HAK2 575 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 ABHD10Q9NUJ1 306 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 DOLKQ9UPQ8 538 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 DYRK1BQ9Y463 629 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 TRPM6Q9BX84 2022 aa11.41□□□□□ -0.58
SMAD4-211ENST00000590499 A0A1W2PPC4 97 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ZSCAN5CA6NGD5 496 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 LRRC72A6NJI9 287 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 RASA4BC9J798 803 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 EEF2KO00418 725 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 RASA4O43374 803 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 LATO43561 262 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 FSBPO95073 299 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 IL2RAP01589 272 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PRNPP04156 253 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 SYPP08247 313 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 MAPK8P45983 427 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 HCAR3P49019 387 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 CCNHP51946 323 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ZNF135P52742 658 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 GEMIN4P57678 1058 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 TAS2R38P59533 333 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PPP2CBP62714 309 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PPP2CAP67775 309 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PIGHQ14442 188 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 DPYSL2Q16555 572 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 POM121L1PQ3SYA9 428 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 CARD16Q5EG05 197 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 TXNRD3NBQ6F5E7 133 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 RIPOR1Q6ZS17 1223 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ARHGAP12Q8IWW6 846 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 MINDY1Q8N5J2 469 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 OR14C36Q8NHC7 312 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 SNX19Q92543 992 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ZNF837Q96EG3 531 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 CHP1Q99653 195 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PACSIN1Q9BY11 444 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ZDHHC5Q9C0B5 715 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 PDFQ9HBH1 243 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 TM9SF3Q9HD45 589 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 DNAAF2Q9NVR5 837 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 IL36AQ9UHA7 158 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 IP6K2Q9UHH9 426 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 ANAPC7Q9UJX3 599 aa11.4□□□□□ -0.58
SMAD4-211ENST00000590499 TPRP12270 2363 aaKnown RBP11.4□□□□□ -0.58
SMAD4-211ENST00000590499 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 FAM47DPA6NHR8 397 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 UPK3BL1B0FP48 263 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 UPK3BL2E5RIL1 263 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 LEFTY1O75610 366 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 TMCC1O94876 653 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 GSRP00390 522 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 ERCC2P18074 760 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 RECQLP46063 649 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-211ENST00000590499 GRIA4P48058 902 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 AFF3P51826 1226 aaKnown RBP11.39□□□□□ -0.59
SMAD4-211ENST00000590499 NDST2P52849 883 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 BOLA3Q53S33 107 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 INO80DQ53TQ3 878 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-211ENST00000590499 PPP6R3Q5H9R7 873 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-211ENST00000590499 PPM1JQ5JR12 505 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
SMAD4-211ENST00000590499 TRIM69Q86WT6 500 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms