RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 USP13Q92995 863 aaPredicted RBP4.85□□□□□ -1.63
SAFB-208ENST00000590485 CUL5Q93034 780 aa4.85□□□□□ -1.63
SAFB-208ENST00000590485 RIC8AQ9NPQ8 531 aa4.85□□□□□ -1.63
SAFB-208ENST00000590485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.85□□□□□ -1.634e-7■□□□□ 11.1
SAFB-208ENST00000590485 KLHL13Q9P2N7 655 aa4.85□□□□□ -1.63
SAFB-208ENST00000590485 RCE1Q9Y256 329 aa4.85□□□□□ -1.63
SAFB-208ENST00000590485 MAPK8IP3Q9UPT6 1336 aa4.85□□□□□ -1.63
SAFB-208ENST00000590485 RBBP6Q7Z6E9 1792 aaKnown RBP4.85□□□□□ -1.63
SAFB-208ENST00000590485 PSME4Q14997 1843 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 MYO3BQ8WXR4 1341 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 SAC3D1A6NKF1 404 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 MCIDASD6RGH6 385 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 H0YGN5 161 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 NCAM2O15394 837 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 CCNT1O60563 726 aaKnown RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 ARHGAP25P42331 645 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 SOX2P48431 317 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 OAZ1P54368 228 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 RIPK4P57078 832 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 SP3Q02447 781 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 GHRHRQ02643 423 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 ALKBH1Q13686 389 aaKnown RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 THOC5Q13769 683 aaKnown RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 SLC4A8Q2Y0W8 1093 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 SLC9C1Q4G0N8 1177 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 CCDC152Q4G0S7 254 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 GXYLT1Q4G148 440 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 ZNF474Q6S9Z5 364 aaPredicted RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 USP38Q8NB14 1042 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 ATP2A3Q93084 1043 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 ZNF333Q96JL9 665 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 TWNKQ96RR1 684 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 SH2D3AQ9BRG2 576 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 MXD3Q9BW11 206 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 RMI1Q9H9A7 625 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 MTMR4Q9NYA4 1195 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 DBF4Q9UBU7 674 aaPredicted RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 DNAJC16Q9Y2G8 782 aa4.84□□□□□ -1.63
SAFB-208ENST00000590485 LRRFIP2Q9Y608 721 aaKnown RBP4.84□□□□□ -1.63
SAFB-208ENST00000590485 COL4A1P02462 1669 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SMIM35A0A1B0GVV1 85 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SLC22A23A1A5C7 686 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 RRN3P2A6NIE6 340 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 C2CD4BA6NLJ0 364 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SYN3O14994 580 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 TSPAN3O60637 253 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 CNPP09543 421 aaKnown RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 CSF1P09603 554 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 HOXB7P09629 217 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 ACP5P13686 325 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 PRPH2P23942 346 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 HOXA7P31268 230 aaPredicted RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 STAT1P42224 750 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 RPS13P62277 151 aaKnown RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 UBE3AQ05086 875 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SRSF4Q08170 494 aaKnown RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 LMOD3Q0VAK6 560 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SUPT20HL1Q3ZLR7 823 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 ALFQ53S48 1182 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 TTLL5Q6EMB2 1281 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 LRIG3Q6UXM1 1119 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 YTHDF3Q7Z739 585 aaKnown RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 LINS1Q8NG48 757 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 OR52N4Q8NGI2 321 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 BCAS4Q8TDM0 211 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 DDB2Q92466 427 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 CLMNQ96JQ2 1002 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 ADAD1Q96M93 576 aaKnown RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
SAFB-208ENST00000590485 TRIM31Q9BZY9 425 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 ARHGAP39Q9C0H5 1083 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 COA1Q9GZY4 146 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 DEFB129Q9H1M3 183 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 NRIP3Q9NQ35 241 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 HYPKQ9NX55 129 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 TNFSF13BQ9Y275 285 aa4.83□□□□□ -1.64
SAFB-208ENST00000590485 COL1A1P02452 1464 aaPredicted RBP4.82□□□□□ -1.64
SAFB-208ENST00000590485 MED23Q9ULK4 1368 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 NPIPB13A6NJU9 1138 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 NPIPB5A8MRT5 1133 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 MASP2O00187 686 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 CHL1O00533 1208 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 ANP32CO43423 234 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 PCCAP05165 728 aaPredicted RBP4.82□□□□□ -1.64
SAFB-208ENST00000590485 CKMT1AP12532 417 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 PKMP14618 531 aaKnown RBP4.82□□□□□ -1.64
SAFB-208ENST00000590485 CPA1P15085 419 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 CPA2P48052 419 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 RPS6KA3P51812 740 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 ADPRHP54922 357 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 STIM1Q13586 685 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 DLGAP5Q15398 846 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 KRT24Q2M2I5 525 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 ARL13AQ5H913 290 aaPredicted RBP4.82□□□□□ -1.64
SAFB-208ENST00000590485 C10orf76Q5T2E6 689 aa4.82□□□□□ -1.64
SAFB-208ENST00000590485 MAP3K21Q5TCX8 1036 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms