RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SCNN1BP51168 640 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 NEK3P51956 506 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 ADPRHP54922 357 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 PPIDQ08752 370 aaKnown RBP21.58■■□□□ 1.05
ATG4D-212ENST00000590096 ZNF805Q5CZA5 627 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 WDR45BQ5MNZ6 344 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 AGBL4Q5VU57 503 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 GDPD4Q6W3E5 623 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 SLC41A1Q8IVJ1 513 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 TRIM58Q8NG06 486 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 OR2T34Q8NGX1 318 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 P3H4Q92791 437 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 FATE1Q969F0 183 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 LGMNQ99538 433 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 OSBPL8Q9BZF1 889 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 BRD8Q9H0E9 1235 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 ARRDC1-AS1Q9H2J1 176 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 C6orf106Q9H6K1 298 aaPredicted RBP21.58■■□□□ 1.05
ATG4D-212ENST00000590096 EFR3BQ9Y2G0 817 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 GVINP1Q7Z2Y8 2422 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 RNF103O00237 685 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 DDX3YO15523 660 aaKnown RBP21.57■■□□□ 1.04
ATG4D-212ENST00000590096 PLRG1O43660 514 aaKnown RBP21.57■■□□□ 1.04
ATG4D-212ENST00000590096 PYGMP11217 842 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 RGRP47804 291 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 AP1B1Q10567 949 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 DCAF12L1Q5VU92 463 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 FBXL19Q6PCT2 694 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 NCEH1Q6PIU2 408 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 BBS12Q6ZW61 710 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 RGL4Q8IZJ4 473 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 LRRN4Q8WUT4 740 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 MAML1Q92585 1016 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 PIGKQ92643 395 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 FAM131CQ96AQ9 280 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 KLHL32Q96NJ5 620 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 OLFM3Q96PB7 478 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 TUBGCP5Q96RT8 1024 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 KDM4CQ9H3R0 1056 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 ATP13A3Q9H7F0 1226 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 NT5MQ9NPB1 228 aa21.57■■□□□ 1.04
ATG4D-212ENST00000590096 OTOGLQ3ZCN5 2332 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3DA0A087WVF3 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3IA0A087WXS9 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3EA0A087X179 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3KA0A087X1G2 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 BCLAF3A2AJT9 711 aaKnown RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3FA6NER0 549 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 C16orf96A6NNT2 1141 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 METTL12A8MUP2 240 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3LB9A6J9 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 MUSKO15146 869 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 FSBPO95073 299 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 PIGNO95427 931 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3HP0C7X1 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 CCNB1P14635 433 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 PECAM1P16284 738 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 SERPINA4P29622 427 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 MPLP40238 635 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 AP1S1P61966 158 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 ADCY2Q08462 1091 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 ITKQ08881 620 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 CFAP58Q5T655 872 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 PIP5KL1Q5T9C9 394 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3GQ6DHY5 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3CQ6IPX1 549 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 PARS2Q7L3T8 475 aaKnown RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TBC1D3Q8IZP1 549 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TEX26Q8N6G2 289 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 SNX19Q92543 992 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 HAUS1Q96CS2 278 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 MGME1Q9BQP7 344 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 SCUBE2Q9NQ36 999 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 RBM22Q9NW64 420 aaKnown RBP eCLIP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 SAE1Q9UBE0 346 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-212ENST00000590096 AMACRQ9UHK6 382 aa21.56■■□□□ 1.04
ATG4D-212ENST00000590096 TNRC6BQ9UPQ9 1833 aaKnown RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 APOC4-APOC2K7ER74 178 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 LRP3O75074 770 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 TJP3O95049 919 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 APOC2P02655 101 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 ADRB3P13945 408 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 ITPKAP23677 461 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 MAXP61244 160 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 BCL2L1Q07817 233 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 ZNF211Q13398 564 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 RPS6KA1Q15418 735 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 RALGPS1Q5JS13 557 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 KIAA0895LQ68EN5 471 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 SYT12Q8IV01 421 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 PGBD5Q8N414 524 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 PAF1Q8N7H5 531 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 ZNF641Q96N77 438 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 NUDCD1Q96RS6 583 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 POLR1EQ9GZS1 481 aaKnown RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 SUV39H2Q9H5I1 410 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 TPX2Q9ULW0 747 aaKnown RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 TTLL3Q9Y4R7 772 aa21.55■■□□□ 1.04
ATG4D-212ENST00000590096 EP300Q09472 2414 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-212ENST00000590096 RALGAPA1Q6GYQ0 2036 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms