RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 NRLP54845 237 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 DSC2Q02487 901 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 BCL2L1Q07817 233 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 P3H1Q32P28 736 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 ARSIQ5FYB1 569 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 TMEM31Q5JXX7 168 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 ALG1LQ6GMV1 187 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 KIAA1324Q6UXG2 1013 aaKnown RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 TMPRSS6Q8IU80 811 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 MMAAQ8IVH4 418 aaKnown RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 KLHL7Q8IXQ5 586 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 CAMKK1Q8N5S9 505 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 TMIEQ8NEW7 156 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 SPATA4Q8NEY3 305 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 PIP4K2CQ8TBX8 421 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 CCDC110Q8TBZ0 833 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 CPEB1Q9BZB8 566 aaKnown RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 SLC25A51Q9H1U9 297 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 DYRK4Q9NR20 520 aa13.79□□□□□ -0.2
VMP1-210ENST00000589823 MYO18AQ92614 2054 aaKnown RBP13.79□□□□□ -0.2
VMP1-210ENST00000589823 TTC24A2A3L6 582 aaPredicted RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 ECEL1O95672 775 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 GAS8O95995 478 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 CTSLP07711 333 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 GABRG2P18507 467 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 CA4P22748 312 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 GKP32189 559 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 CD68P34810 354 aaPredicted RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 PSMD8P48556 350 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 RPS14P62263 151 aaKnown RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 ZBTB16Q05516 673 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 PRPSAP1Q14558 356 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 CST6Q15828 149 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 FAM182AQ5T1J6 154 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 GDPD4Q6W3E5 623 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 CACUL1Q86Y37 369 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 C1orf210Q8IVY1 113 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 IMP4Q96G21 291 aaKnown RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 PPP1R16AQ96I34 528 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 MRGPRX1Q96LB2 322 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 FCRL5Q96RD9 977 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 RBM15Q96T37 977 aaKnown RBP eCLIP13.78□□□□□ -0.2
VMP1-210ENST00000589823 MKRN2Q9H000 416 aaKnown RBP13.78□□□□□ -0.2
VMP1-210ENST00000589823 GBA3Q9H227 469 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 PAK5Q9P286 719 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 WASF2Q9Y6W5 498 aa13.78□□□□□ -0.2
VMP1-210ENST00000589823 GOLGA6CA6NDK9 693 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 GOLGA6BA6NDN3 693 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
VMP1-210ENST00000589823 MID1O15344 667 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 SOCS5O75159 536 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 GJB3O75712 270 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 ANXA9O76027 345 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PIGNO95427 931 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 UGT2B4P06133 528 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 GOLGA6DP0CG33 693 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 NDUFV2P19404 249 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 C5AR1P21730 350 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PSMB4P28070 264 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 SLC8A1P32418 973 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 CD86P42081 329 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
VMP1-210ENST00000589823 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 NIPAL4Q0D2K0 466 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 CKAP5Q14008 2032 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PPP1R7Q15435 360 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
VMP1-210ENST00000589823 ZNF805Q5CZA5 627 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 CAMK1DQ8IU85 385 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 CEP112Q8N8E3 955 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 GANCQ8TET4 914 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 KLHL32Q96NJ5 620 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 KRT12Q99456 494 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 SLC6A17Q9H1V8 727 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 SUV39H2Q9H5I1 410 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PCDH9Q9HC56 1237 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PRMT8Q9NR22 394 aaPredicted RBP13.77□□□□□ -0.21
VMP1-210ENST00000589823 GOLGA6AQ9NYA3 693 aa13.77□□□□□ -0.21
VMP1-210ENST00000589823 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms