RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 TSGA13Q96PP4 275 aa20.4■□□□□ 0.86
RBM42-204ENST00000589559 ATP13A3Q9H7F0 1226 aa20.4■□□□□ 0.86
RBM42-204ENST00000589559 TMEM74BQ9NUR3 256 aa20.4■□□□□ 0.86
RBM42-204ENST00000589559 ETNK2Q9NVF9 386 aa20.4■□□□□ 0.86
RBM42-204ENST00000589559 SERGEFQ9UGK8 458 aa20.4■□□□□ 0.86
RBM42-204ENST00000589559 EIF2B4Q9UI10 523 aaKnown RBP20.4■□□□□ 0.86
RBM42-204ENST00000589559 GPR179Q6PRD1 2367 aa20.39■□□□□ 0.86
RBM42-204ENST00000589559 A0A1W2PPC4 97 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 TSPAN6O43657 245 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 KRT1P04264 644 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 XPAP23025 273 aaPredicted RBP20.39■□□□□ 0.85
RBM42-204ENST00000589559 SERPINA4P29622 427 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 GARSP41250 739 aaKnown RBP20.39■□□□□ 0.85
RBM42-204ENST00000589559 COPS2P61201 443 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 AP1S1P61966 158 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 RACK1P63244 317 aaKnown RBP20.39■□□□□ 0.85
RBM42-204ENST00000589559 GALNT2Q10471 571 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 SETMARQ53H47 684 aaPredicted RBP20.39■□□□□ 0.85
RBM42-204ENST00000589559 AGBL4Q5VU57 503 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 NCBP2-AS2Q69YL0 99 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 SRLQ86TD4 932 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 KATNAL2Q8IYT4 538 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 FAM174AQ8TBP5 190 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 LHX3Q9UBR4 397 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 CDV3Q9UKY7 258 aaKnown RBP20.39■□□□□ 0.85
RBM42-204ENST00000589559 ACTL7AQ9Y615 435 aa20.39■□□□□ 0.85
RBM42-204ENST00000589559 TNRC6BQ9UPQ9 1833 aaKnown RBP20.38■□□□□ 0.85
RBM42-204ENST00000589559 C16orf96A6NNT2 1141 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 TNNT1P13805 278 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 ADRB3P13945 408 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 IRX4P78413 519 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 PDK1Q15118 436 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 TFDP3Q5H9I0 405 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 PIP5KL1Q5T9C9 394 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 KIAA1161Q6NSJ0 714 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 BRAT1Q6PJG6 821 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 TTC7BQ86TV6 843 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 LRRC8AQ8IWT6 810 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 EXD1Q8NHP7 514 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 KLHL32Q96NJ5 620 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 SUV39H2Q9H5I1 410 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.38■□□□□ 0.85
RBM42-204ENST00000589559 GVINP1Q7Z2Y8 2422 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 LAMA1P25391 3075 aa20.38■□□□□ 0.85
RBM42-204ENST00000589559 NEMP1O14524 444 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 ARHGAP33O14559 1287 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 PPP1R12AO14974 1030 aaPredicted RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 MATN3O15232 486 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 LATO43561 262 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 DFNA5O60443 496 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 PCDH8O95206 1070 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 UGT2B4P06133 528 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 MAOBP27338 520 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 MMP13P45452 471 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 GRIA4P48058 902 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 RPS21P63220 83 aaKnown RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 BCL2L1Q07817 233 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 ELP6Q0PNE2 266 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 OVGP1Q12889 678 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 SF3A2Q15428 464 aaKnown RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 CCDC6Q16204 474 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 POM121L1PQ3SYA9 428 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 ATXN7L2Q5T6C5 722 aaPredicted RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 SLC9A4Q6AI14 798 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 ADAT2Q7Z6V5 191 aaKnown RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 RFX6Q8HWS3 928 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 PAF1Q8N7H5 531 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 TSEN2Q8NCE0 465 aaKnown RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 ACRBPQ8NEB7 543 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 ARRDC3Q96B67 414 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 RNF25Q96BH1 459 aaPredicted RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 HDAC11Q96DB2 347 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 RTKNQ9BST9 563 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 CAPN10Q9HC96 672 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 TMEM9BQ9NQ34 198 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 KLHL11Q9NVR0 708 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 AMFRQ9UKV5 643 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 EFR3BQ9Y2G0 817 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 REXO2Q9Y3B8 237 aaKnown RBP20.37■□□□□ 0.85
RBM42-204ENST00000589559 PCDHA3Q9Y5H8 950 aa20.37■□□□□ 0.85
RBM42-204ENST00000589559 GON4LQ3T8J9 2241 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.36■□□□□ 0.85
RBM42-204ENST00000589559 MIF4GDA9UHW6 222 aaKnown RBP20.36■□□□□ 0.85
RBM42-204ENST00000589559 SCNN1BP51168 640 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 SLC10A7Q0GE19 358 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 PUM1Q14671 1186 aaKnown RBP eCLIP20.36■□□□□ 0.85
RBM42-204ENST00000589559 CPNE8Q86YQ8 564 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 NDUFAF2Q8N183 169 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 PQLC3Q8N755 202 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 UBL4BQ8N7F7 174 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 CCNYQ8ND76 341 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 EDEM2Q9BV94 578 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 LACRTQ9GZZ8 138 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 DMXL1Q9Y485 3027 aa20.36■□□□□ 0.85
RBM42-204ENST00000589559 RCCD1A6NED2 376 aa20.35■□□□□ 0.85
RBM42-204ENST00000589559 C3orf70A6NLC5 250 aaPredicted RBP20.35■□□□□ 0.85
RBM42-204ENST00000589559 PRAMEF26H0Y7S4 382 aa20.35■□□□□ 0.85
RBM42-204ENST00000589559 ZNF189O75820 626 aaPredicted RBP20.35■□□□□ 0.85
RBM42-204ENST00000589559 IGHV4-34P06331 123 aa20.35■□□□□ 0.85
RBM42-204ENST00000589559 CCDC175P0C221 793 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms