RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ACOT9Q9Y305 439 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 M0QZQ0 153 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SLC22A2O15244 555 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CACNG3O60359 315 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 LYPLA1O75608 230 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TOP3BO95985 862 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ALDH1A1P00352 501 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CHRNA1P02708 482 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 THRAP10827 490 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TYMPP19971 482 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ADSLP30566 484 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 THPOP40225 353 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ST13P50502 369 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 RENBPP51606 427 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ZBTB17Q13105 803 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PRKAA1Q13131 559 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 LIPMQ5VYY2 423 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 C17orf99Q6UX52 265 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CXCL17Q6UXB2 119 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 Q6ZVU0 165 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CMC1Q7Z7K0 106 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SETD3Q86TU7 594 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TAC4Q86UU9 113 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 LPPQ93052 612 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PRR11Q96HE9 360 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SERPINB11Q96P15 392 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SERPINI1Q99574 410 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 FAM167BQ9BTA0 163 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 KLF16Q9BXK1 252 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ACE2Q9BYF1 805 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 COG4Q9H9E3 785 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 MRM3Q9HC36 420 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 GLOD4Q9HC38 313 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PNPOQ9NVS9 261 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 OXSMQ9NWU1 459 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SLC17A6Q9P2U8 582 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CORO1CQ9ULV4 474 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PADI3Q9ULW8 664 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 RAP2CQ9Y3L5 183 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 FAM221BA6H8Z2 402 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 HDAC3O15379 428 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 IRAK2O43187 625 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TBX10O75333 385 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 KRT36O76013 467 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 STMN1P16949 149 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TPH1P17752 444 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RPL14P50914 215 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 YWHAHQ04917 246 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 LAMB3Q13751 1172 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CES4AQ5XG92 561 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SEL1L3Q68CR1 1132 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CAPRIN2Q6IMN6 1127 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 EPGNQ6UW88 154 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ZYG11AQ6WRX3 759 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RIPOR1Q6ZS17 1223 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 KIAA0408Q6ZU52 694 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TP53INP2Q8IXH6 220 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 DCP1BQ8IZD4 617 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TDRD5Q8NAT2 981 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 DTX3LQ8TDB6 740 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 PDCD6IPQ8WUM4 868 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 WDR60Q8WVS4 1066 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 STON2Q8WXE9 905 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RSPH1Q8WYR4 309 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CCDC126Q96EE4 140 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CELF6Q96J87 481 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 EAF1Q96JC9 268 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF333Q96JL9 665 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 C1orf74Q96LT6 269 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SORT1Q99523 831 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF184Q99676 751 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 APOL2Q9BQE5 337 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MLPHQ9BV36 600 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 DRC3Q9H069 523 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SMOC2Q9H3U7 446 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 FBXO44Q9H4M3 255 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TCF7L2Q9NQB0 619 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TBC1D13Q9NVG8 400 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 NMRK1Q9NWW6 199 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MIOSQ9NXC5 875 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 UBP1Q9NZI7 540 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 IL1RAPL1Q9NZN1 696 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MAGED2Q9UNF1 606 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 PLA2G4CQ9UP65 541 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RUVBL2Q9Y230 463 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 A0A087X1B8 175 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 PAGE1O75459 146 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 VAPBO95292 243 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 POMCP01189 267 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms