RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 CDK5RAP1Q96SZ6 601 aaKnown RBP8.86□□□□□ -0.99
KDM4B-207ENST00000588961 ELAC2Q9BQ52 826 aaKnown RBP8.86□□□□□ -0.99
KDM4B-207ENST00000588961 HPS4Q9NQG7 708 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 ARHGEF3Q9NR81 526 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 BFARQ9NZS9 450 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 MARCH2Q9P0N8 246 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 TBK1Q9UHD2 729 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 AAR2Q9Y312 384 aaKnown RBP8.86□□□□□ -0.99
KDM4B-207ENST00000588961 USH1CQ9Y6N9 552 aa8.86□□□□□ -0.99
KDM4B-207ENST00000588961 MSI1O43347 362 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 GREM1O60565 184 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 EDF1O60869 148 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 DCTN3O75935 186 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 STC2O76061 302 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 METTL18O95568 372 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 KLKB1P03952 638 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 POLBP06746 335 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 ERCC2P18074 760 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 CCR1P32246 355 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 CCNFP41002 786 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 TPI1P60174 286 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PITX1P78337 314 aaPredicted RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 RIPK1Q13546 671 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 RUNX3Q13761 415 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PRPSAP1Q14558 356 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 SETDB1Q15047 1291 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PDGFRLQ15198 375 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 MLF2Q15773 248 aaPredicted RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 QPCTQ16769 361 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 EML3Q32P44 896 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 KBTBD12Q3ZCT8 623 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 FYB2Q5VWT5 728 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 TIGD7Q6NT04 549 aaPredicted RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 MSANTD2Q6P1R3 559 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 KLHDC10Q6PID8 442 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 TPRG1Q6ZUI0 275 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 MARK2Q7KZI7 788 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 FAM131BQ86XD5 332 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 ANKMY2Q8IV38 441 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 BBS7Q8IWZ6 715 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 ADGRG2Q8IZP9 1017 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 FLCNQ8NFG4 579 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 CFAP61Q8NHU2 1237 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 CCDC110Q8TBZ0 833 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 DNASE1L2Q92874 299 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 ATP2A3Q93084 1043 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PBXIP1Q96AQ6 731 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 STAMBPL1Q96FJ0 436 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 APOPT1Q96IL0 206 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 MFSD1Q9H3U5 465 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 FAM96AQ9H5X1 160 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 LRRC40Q9H9A6 602 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 OLA1Q9NTK5 396 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PIGVQ9NUD9 493 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 DNAJC17Q9NVM6 304 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 GPATCH2LQ9NWQ4 482 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 DDIT4Q9NX09 232 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PPARGC1AQ9UBK2 798 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 CTNNAL1Q9UBT7 734 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 OR12D3Q9UGF7 316 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 DCDC2Q9UHG0 476 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 RPL26L1Q9UNX3 145 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 SLC12A4Q9UP95 1085 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 PIAS3Q9Y6X2 628 aa8.85□□□□□ -0.99
KDM4B-207ENST00000588961 HELZP42694 1942 aaKnown RBP8.85□□□□□ -0.99
KDM4B-207ENST00000588961 TICRRQ7Z2Z1 1910 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 SYNJ2BP-COX16A0A087WUM0 186 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 FAM237BA0A1B0GVD1 139 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 SHISA7A6NL88 538 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 GOLGA8MH3BSY2 632 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 TK2O00142 265 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 USP1O94782 785 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 AP2A1O95782 977 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 TROVE2P10155 538 aaKnown RBP eCLIP8.84□□□□□ -0.993e-7■■■■■ 33.2
KDM4B-207ENST00000588961 VCANP13611 3396 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 CREB1P16220 341 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 TFE3P19532 575 aaPredicted RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 CORO1AP31146 461 aaKnown RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 RPA3P35244 121 aaPredicted RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 GARSP41250 739 aaKnown RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 ETV4P43268 484 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 NEK3P51956 506 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 WASHC5Q12768 1159 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 BNIP1Q12981 228 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 ITPRIPL2Q3MIP1 535 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 TMEM31Q5JXX7 168 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 UBAP2Q5T6F2 1119 aaKnown RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 RNF187Q5TA31 235 aaPredicted RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 GRTP1Q5TC63 336 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 ATG16L1Q676U5 607 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 KCTD11Q693B1 232 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
KDM4B-207ENST00000588961 NAPEPLDQ6IQ20 393 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 LVRNQ6Q4G3 990 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 UNC5AQ6ZN44 842 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 HTR3DQ70Z44 454 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 ZNF534Q76KX8 674 aa8.84□□□□□ -0.99
KDM4B-207ENST00000588961 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms