RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TCAF2A6NFQ2 919 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TPP1O14773 563 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SCAMP3O14828 347 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 KDELR3O43731 214 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TLL1O43897 1013 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TBL1XO60907 577 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 LATS1O95835 1130 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 C8AP07357 584 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 ITGA2BP08514 1039 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 F7P08709 466 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 NEFHP12036 1026 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HDCP19113 662 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HOXD9P28356 352 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 GABRR2P28476 465 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 PDE1BQ01064 536 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 IFT88Q13099 833 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 DNAJC3Q13217 504 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HSP90AA5PQ58FG0 334 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RNF187Q5TA31 235 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 GRTP1Q5TC63 336 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RNF219Q5W0B1 726 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 PDPK2PQ6A1A2 396 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RGS9BPQ6ZS82 235 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 FAM47EQ6ZV65 393 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SPATA21Q7Z572 469 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TMC8Q8IU68 726 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 CCDC117Q8IWD4 279 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 NDUFAF2Q8N183 169 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 BBS5Q8N3I7 341 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 ANKS4BQ8N8V4 417 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HJURPQ8NCD3 748 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 KREMEN2Q8NCW0 462 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TTC16Q8NEE8 873 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 OR52K2Q8NGK3 314 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 MRPS31Q92665 395 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 CABS1Q96KC9 395 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF599Q96NL3 588 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 AGAP2Q99490 1192 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RAD9AQ99638 391 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RBBP8Q99708 897 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SEMA3CQ99985 751 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 TCF25Q9BQ70 676 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 CINPQ9BW66 212 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SLC13A1Q9BZW2 595 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 POLR1EQ9GZS1 481 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 MUC3BQ9H195 1237 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 PDFQ9HBH1 243 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 MRM3Q9HC36 420 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 ATP13A1Q9HD20 1204 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 VPS45Q9NRW7 570 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HAUS2Q9NVX0 235 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 UBA2Q9UBT2 640 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SEPT3Q9UH03 358 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 GGA2Q9UJY4 613 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 RRP15Q9Y3B9 282 aaKnown RBP8.87□□□□□ -0.99
SMAD4-206ENST00000588860 HCN4Q9Y3Q4 1203 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 SLC4A7Q9Y6M7 1214 aa8.87□□□□□ -0.99
SMAD4-206ENST00000588860 C2orf16Q68DN1 1984 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SCN8AQ9UQD0 1980 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ATXN2Q99700 1313 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 TRAV19A0A0A6YYK7 116 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ILVBLA1L0T0 632 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 TYW5A2RUC4 315 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 GOLGA8TH3BQL2 631 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 MUSKO15146 869 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CCL16O15467 120 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SNX3O60493 162 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 GLUD1P00367 558 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 DHRS4L1P0CG22 281 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 MYL4P12829 197 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PAMP19021 973 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 GLDCP23378 1020 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CDC25CP30307 473 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SPRP35270 261 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ABCG1P45844 678 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SERPINB4P48594 390 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SERPINB8P50452 374 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SERPINH1P50454 418 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CSE1LP55060 971 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ERVFC1P60507 584 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ITIH4Q14624 930 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SIRPB2Q5JXA9 342 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PPM1LQ5SGD2 360 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 LILRA6Q6PI73 481 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 RANBP10Q6VN20 620 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SETD3Q86TU7 594 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 LAPTM4BQ86VI4 370 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CNPY4Q8N129 248 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 CARNMT1Q8N4J0 409 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ARRDC2Q8TBH0 407 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ACMSDQ8TDX5 336 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 HERVK_113Q902F9 699 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF75CPQ92670 426 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 TADA1Q96BN2 335 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 GRAMD1AQ96CP6 724 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 IFT43Q96FT9 208 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms