RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 UHMK1Q8TAS1 419 aaKnown RBP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 WFIKKN2Q8TEU8 576 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 MRGPRX2Q96LB1 330 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 SIGLEC10Q96LC7 697 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 NUDCD1Q96RS6 583 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 VPS37BQ9H9H4 285 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 LHX3Q9UBR4 397 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 OTOL1A6NHN0 477 aaPredicted RBP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 K7ERQ8 282 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 TRIM24O15164 1050 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 NUDT17P0C025 328 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 CISD3P0C7P0 127 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 MGAT1P26572 445 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 ADRA1AP35348 466 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 CTSOP43234 321 aaPredicted RBP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 RGRP47804 291 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 NPY2RP49146 381 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 SLC14A2Q15849 920 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 UBAP2Q5T6F2 1119 aaKnown RBP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 LRIG3Q6UXM1 1119 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 KDELC2Q7Z4H8 507 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 ETFBKMTQ8IXQ9 262 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 AGGF1Q8N302 714 aaeCLIP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 TADA1Q96BN2 335 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 IFT43Q96FT9 208 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 RPL10LQ96L21 214 aaKnown RBP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 NOD2Q9HC29 1040 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 LRRC4CQ9HCJ2 640 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 DEC1Q9P2X7 70 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 ZC3H7BQ9UGR2 993 aaKnown RBP22.54■■□□□ 1.2
ATG4D-209ENST00000588857 HS3ST2Q9Y278 367 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 SLC27A6Q9Y2P4 619 aa22.54■■□□□ 1.2
ATG4D-209ENST00000588857 KIAA1549LQ6ZVL6 1849 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 C19orf67A6NJJ6 358 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 SMAD6O43541 496 aaKnown RBP22.53■■□□□ 1.2
ATG4D-209ENST00000588857 GJB3O75712 270 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 TSHRP16473 764 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 CR2P20023 1033 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 PHBP35232 272 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 EIF3BP55884 814 aaKnown RBP22.53■■□□□ 1.2
ATG4D-209ENST00000588857 GPS2Q13227 327 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 GEN1Q17RS7 908 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 CAPN12Q6ZSI9 719 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 C12orf40Q86WS4 652 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 RNF135Q8IUD6 432 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 IGDCC3Q8IVU1 814 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 MPP5Q8N3R9 675 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 STAMBPL1Q96FJ0 436 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 EBNA1BP2Q99848 306 aaKnown RBP22.53■■□□□ 1.2
ATG4D-209ENST00000588857 WDR83Q9BRX9 315 aaKnown RBP22.53■■□□□ 1.2
ATG4D-209ENST00000588857 SAMD15Q9P1V8 674 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 NUMBLQ9Y6R0 609 aa22.53■■□□□ 1.2
ATG4D-209ENST00000588857 A0A087WUV0 522 aaPredicted RBP22.52■■□□□ 1.2
ATG4D-209ENST00000588857 ABHD2P08910 425 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 STK19P49842 368 aaPredicted RBP22.52■■□□□ 1.2
ATG4D-209ENST00000588857 HTR4Q13639 388 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 RALGPS1Q5JS13 557 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 GRAMD4Q6IC98 578 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 RANBP10Q6VN20 620 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 C3orf62Q6ZUJ4 267 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 OR2W6PQ8NHA6 318 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 ZBTB9Q96C00 473 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 CFAP36Q96G28 342 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 NAT9Q9BTE0 207 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 RPP25Q9BUL9 199 aaKnown RBP22.52■■□□□ 1.2
ATG4D-209ENST00000588857 GTSE1Q9NYZ3 720 aa22.52■■□□□ 1.2
ATG4D-209ENST00000588857 ANHXE9PGG2 379 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SPAG6O75602 509 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 ATP5BP06576 529 aaKnown RBP22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SRCP12931 536 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SLC6A11P48066 632 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 IHHQ14623 411 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 GAB4Q2WGN9 574 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 ITPRIPL2Q3MIP1 535 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 MTERF4Q7Z6M4 381 aaKnown RBP22.51■■□□□ 1.19
ATG4D-209ENST00000588857 CCNJLQ8IV13 435 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SH2D3CQ8N5H7 860 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 TTC8Q8TAM2 541 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 FEM1CQ96JP0 617 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 CCDC77Q9BR77 488 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 CIPCQ9C0C6 399 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 IL22Q9GZX6 179 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SYBUQ9NX95 663 aa22.51■■□□□ 1.19
ATG4D-209ENST00000588857 SHBGP04278 402 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 TPH1P17752 444 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 SSTR1P30872 391 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 NNMTP40261 264 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 GPX6P59796 221 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 CRADDP78560 199 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 CDK18Q07002 472 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ACCSLQ4AC99 568 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 CERCAMQ5T4B2 595 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ATXN7L2Q5T6C5 722 aaPredicted RBP22.5■■□□□ 1.19
ATG4D-209ENST00000588857 TMEM215Q68D42 235 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 SRLQ86TD4 932 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 GOLGA6L1Q8N7Z2 621 aa22.5■■□□□ 1.19
ATG4D-209ENST00000588857 ISG20Q96AZ6 181 aaKnown RBP22.5■■□□□ 1.19
ATG4D-209ENST00000588857 PHF7Q9BWX1 381 aaPredicted RBP22.5■■□□□ 1.19
ATG4D-209ENST00000588857 TM6SF2Q9BZW4 377 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms