RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 GEMIN4P57678 1058 aaKnown RBP14.37□□□□□ -0.11
ERCC1-205ENST00000587888 SNRPD1P62314 119 aaKnown RBP14.37□□□□□ -0.11
ERCC1-205ENST00000587888 CDR2Q01850 454 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 C1orf61Q13536 156 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 BROXQ5VW32 411 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 GUSBP11Q6P575 273 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 EFL1Q7Z2Z2 1120 aaKnown RBP14.37□□□□□ -0.11
ERCC1-205ENST00000587888 VPS36Q86VN1 386 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 NLRP14Q86W24 1093 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 RBFAQ8N0V3 343 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 CCDC185Q8N715 623 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 RAB7BQ96AH8 199 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 MAGEH1Q9H213 219 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 VPS16Q9H269 839 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-205ENST00000587888 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 NLRC4Q9NPP4 1024 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 NOCTQ9UK39 431 aaKnown RBP14.37□□□□□ -0.11
ERCC1-205ENST00000587888 CELSR3Q9NYQ7 3312 aa14.37□□□□□ -0.11
ERCC1-205ENST00000587888 MUSKO15146 869 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 KLK10O43240 276 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 KDELR3O43731 214 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 RAMP2O60895 175 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 GCATO75600 419 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 LRIG2O94898 1065 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 GSRP00390 522 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 CYP1A1P04798 512 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-205ENST00000587888 MMP8P22894 467 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 PFN3P60673 137 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
ERCC1-205ENST00000587888 FMO1Q01740 532 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 NRG1Q02297 640 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-205ENST00000587888 PTK2BQ14289 1009 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 NR0B2Q15466 257 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 ISXQ2M1V0 245 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 PRRT3Q5FWE3 981 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 ARHGAP40Q5TG30 622 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 FAXCQ5TGI0 409 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 ZNF677Q86XU0 584 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 FAM172AQ8WUF8 416 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 BTN2A2Q8WVV5 523 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 TBC1D31Q96DN5 1066 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 HIC2Q96JB3 615 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 GANQ9H2C0 597 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 TMEM248Q9NWD8 314 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 SPASTQ9UBP0 616 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 SATB2Q9UPW6 733 aa14.36□□□□□ -0.11
ERCC1-205ENST00000587888 FASNP49327 2511 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 EME2A4GXA9 379 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 C2CD4BA6NLJ0 364 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 KRT3P12035 628 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 PERM1Q5SV97 790 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 STRADAQ7RTN6 431 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 PYROXD2Q8N2H3 581 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 LSM14AQ8ND56 463 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 KCNE4Q8WWG9 221 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 ASB12Q8WXK4 309 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 ARHGEF26Q96DR7 871 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 SLC13A1Q9BZW2 595 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 KLC2Q9H0B6 622 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 MBNL1Q9NR56 388 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 FAM207AQ9NSI2 230 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
ERCC1-205ENST00000587888 APOBEC3BQ9UH17 382 aaKnown RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 PNMA8BQ9ULN7 279 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-205ENST00000587888 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 TPP1O14773 563 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
ERCC1-205ENST00000587888 TM7SF2O76062 418 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
ERCC1-205ENST00000587888 ANXA6P08133 673 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 RBMS1P29558 406 aaKnown RBP14.34□□□□□ -0.11
ERCC1-205ENST00000587888 SOX5P35711 763 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 IGFALSP35858 605 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 EIF4A3P38919 411 aaKnown RBP14.34□□□□□ -0.11
ERCC1-205ENST00000587888 PTPN9P43378 593 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 HDAC4P56524 1084 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 TMPRSS3P57727 454 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 ERVPABLB-1P60509 514 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 RAD51Q06609 339 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 TCEA2Q15560 299 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
ERCC1-205ENST00000587888 TAF1BQ53T94 588 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-205ENST00000587888 SLFN11Q7Z7L1 901 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms