RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 ZNF248Q8NDW4 579 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 GPT2Q8TD30 523 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 RXFP2Q8WXD0 754 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 ATXN7L3BQ96GX2 97 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KLHL32Q96NJ5 620 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KCNK17Q96T54 332 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KLF6Q99612 283 aaPredicted RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 WRAP53Q9BUR4 548 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 C1QTNF2Q9BXJ5 285 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 POLR1BQ9H9Y6 1135 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 SAMSN1Q9NSI8 373 aaKnown RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 SATB2Q9UPW6 733 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 KALRNO60229 2985 aa6.52□□□□□ -1.37
SDF2-205ENST00000587629 ARID1BQ8NFD5 2236 aaPredicted RBP6.52□□□□□ -1.37
SDF2-205ENST00000587629 SHROOM3Q8TF72 1996 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 TDRD6O60522 2096 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 TEX51A0A1B0GUA7 166 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 A0A1W2PNU3 283 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 F8VZ95 297 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 AGRPO00253 132 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 TSPAN6O43657 245 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 BUB1O43683 1085 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 AP1G1O43747 822 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 GCATO75600 419 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 LSM8O95777 96 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 GP1BAP07359 652 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 CELA2BP08218 269 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 PLEKP08567 350 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 PLA2G2AP14555 144 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 UCHL3P15374 230 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 CHRNB2P17787 502 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 SCNN1AP37088 669 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 LSSP48449 732 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 THOP1P52888 689 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 UBE2HP62256 183 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 NOMO3P69849 1222 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 CFHR1Q03591 330 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 EIF2B5Q13144 721 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 LY6DQ14210 128 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 POLD3Q15054 466 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 NR0B2Q15466 257 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 ISXQ2M1V0 245 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 ARL13BQ3SXY8 428 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 CCDC14Q49A88 953 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 ZNF805Q5CZA5 627 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PERM1Q5SV97 790 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 FAXCQ5TGI0 409 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 BROXQ5VW32 411 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 ZCCHC8Q6NZY4 707 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 PCSK4Q6UW60 755 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 GDPD4Q6W3E5 623 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 NYAP1Q6ZVC0 841 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 RD3Q7Z3Z2 195 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 BNIPLQ7Z465 357 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 LSMEM2Q8N112 164 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PYROXD2Q8N2H3 581 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 CCDC185Q8N715 623 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 FAM181AQ8N9Y4 354 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 MSANTD4Q8NCY6 345 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 JOSD2Q8TAC2 188 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 KCNE4Q8WWG9 221 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 IFT43Q96FT9 208 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 HIC2Q96JB3 615 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 VCPIP1Q96JH7 1222 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 ZNF578Q96N58 590 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 IL12RB2Q99665 862 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 C11orf70Q9BRQ4 267 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 DUSP23Q9BVJ7 150 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 NAA15Q9BXJ9 866 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 STK33Q9BYT3 514 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 KLC2Q9H0B6 622 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 NLRC4Q9NPP4 1024 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 MBNL1Q9NR56 388 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 EVA1BQ9NVM1 165 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 TAB2Q9NYJ8 693 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 SIRPGQ9P1W8 387 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PPARGC1AQ9UBK2 798 aaKnown RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 GULP1Q9UBP9 304 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PNMA8BQ9ULN7 279 aaPredicted RBP6.51□□□□□ -1.37
SDF2-205ENST00000587629 HPCAL4Q9UM19 191 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 COQ6Q9Y2Z9 468 aa6.51□□□□□ -1.37
SDF2-205ENST00000587629 PYCARD-AS1I3L0S3 204 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 YY2O15391 372 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 INSIG1O15503 277 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 RAMP2O60895 175 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 TMCC1O94876 653 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 LRIG2O94898 1065 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 POP4O95707 220 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 ANXA6P08133 673 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 TSHRP16473 764 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 RHOQP17081 205 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 RBMS1P29558 406 aaKnown RBP6.5□□□□□ -1.37
SDF2-205ENST00000587629 SDC4P31431 198 aa6.5□□□□□ -1.37
SDF2-205ENST00000587629 RFC1P35251 1148 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms