RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NPHS1O60500 1241 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 CLPTM1O96005 669 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 TFAP2AP05549 437 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 SRGAP2BP0DMP2 458 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 RGS2P41220 211 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MPP1Q00013 466 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 POU6F1Q14863 301 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 BHLHA9Q7RTU4 235 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 SPATA24Q86W54 205 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 SPATA6LQ8N4H0 392 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 USP33Q8TEY7 942 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 SENP8Q96LD8 212 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 ZFP42Q96MM3 310 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 PPP1R10Q96QC0 940 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 NDNQ99608 321 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 OMDQ99983 421 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 TBL1YQ9BQ87 522 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 KATNAL1Q9BW62 490 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 FTHL17Q9BXU8 183 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 PCDHGB4Q9UN71 923 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 LZTS1Q9Y250 596 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 Q9Y3F1 56 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 PCDHGB5Q9Y5G0 923 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 A0A1B0GVG6 124 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 FAM95CA0A1B0GW59 222 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MYADML2A6NDP7 307 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 TMEM233B4DJY2 109 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 ARNTP27540 789 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 CLCN2P51788 898 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 COG7P83436 770 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 ESRP1Q6NXG1 681 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 NPAS2Q99743 824 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 PKP2Q99959 881 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 HHLA1C9JL84 531 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 LHX1P48742 406 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 SH2D4BQ5SQS7 431 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 DENND5AQ6IQ26 1287 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 PIWIL4Q7Z3Z4 852 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 CEP70Q8NHQ1 597 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 TMA16Q96EY4 203 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 KLHL32Q96NJ5 620 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 MRPL57Q9BQC6 102 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 UBE2OQ9C0C9 1292 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 CACNG4Q9UBN1 327 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 TRPM7Q96QT4 1865 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 KLHL33A6NCF5 533 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 SDHDO14521 159 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 ANXA9O76027 345 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 TNFAIP8O95379 198 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 CCNCP24863 283 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 ATXN3P54252 364 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 SLC5A9Q2M3M2 681 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 ARHGAP36Q6ZRI8 547 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 AHI1Q8N157 1196 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 PELI3Q8N2H9 469 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 TXNDC5Q8NBS9 432 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 CNBD2Q96M20 576 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 FCRL5Q96RD9 977 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 MRPL1Q9BYD6 325 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 UTP6Q9NYH9 597 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 PLK2Q9NYY3 685 aa17.04■□□□□ 0.32
PRKCSH-205ENST00000587327 HSPA13P48723 471 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 RPS6KA3P51812 740 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 DNAJB13P59910 316 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 PTK2BQ14289 1009 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 POTEHQ6S545 545 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 TRIM67Q6ZTA4 783 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 CCDC117Q8IWD4 279 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 TMEM102Q8N9M5 508 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 PPHLN1Q8NEY8 458 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 NMD3Q96D46 503 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 ZNF419Q96HQ0 510 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 UNKQ9C0B0 810 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 ZNF696Q9H7X3 374 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 TIMM13Q9Y5L4 95 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 PTCH2Q9Y6C5 1203 aa17.03■□□□□ 0.32
PRKCSH-205ENST00000587327 DFFAO00273 331 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 TRIM38O00635 465 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 VILLO15195 856 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 TCN1P20061 433 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 SLC1A2P43004 574 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 TAS2R39P59534 338 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 MYBPC1Q00872 1141 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 GK3PQ14409 553 aa17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 RWDD4Q6NW29 188 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-205ENST00000587327 TAC4Q86UU9 113 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms