RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CHST14Q8NCH0 376 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 HEPHQ9BQS7 1158 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 VPS45Q9NRW7 570 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 EVLQ9UI08 416 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 WASF2Q9Y6W5 498 aa17.18■□□□□ 0.34
PRKCSH-203ENST00000586486 A0A0C4DFX4 3053 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 RAD51CO43502 376 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 BNIP3LO60238 219 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 GJB3O75712 270 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 METTL18O95568 372 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 SERPINF2P08697 491 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 COL9A1P20849 921 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 PSMB4P28070 264 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 FDFT1P37268 417 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 CLCN5P51795 746 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 SKOR1P84550 965 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 KIAA1211LQ6NV74 962 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 PRUNE1Q86TP1 453 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 PRPF39Q86UA1 669 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 STK40Q8N2I9 435 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 RYBPQ8N488 228 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 NOA1Q8NC60 698 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 OR6K2Q8NGY2 324 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 OR2T3Q8NH03 318 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 FAM129BQ96TA1 746 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 GORASP1Q9BQQ3 440 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 RSPH9Q9H1X1 276 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 ATP13A3Q9H7F0 1226 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 IL36AQ9UHA7 158 aa17.17■□□□□ 0.34
PRKCSH-203ENST00000586486 SOCS5O75159 536 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 ANXA9O76027 345 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 PRNPP04156 253 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 DGKEP52429 567 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 COPAP53621 1224 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 PRPSAP1Q14558 356 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 IHHQ14623 411 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 C8orf74Q6P047 294 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 TMEM92Q6UXU6 159 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 BMP8AQ7Z5Y6 402 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 TMIEQ8NEW7 156 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 OSBPL1AQ9BXW6 950 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 ZDHHC6Q9H6R6 413 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 RRAGDQ9NQL2 400 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 PPM1HQ9ULR3 514 aa17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-203ENST00000586486 TTC24A2A3L6 582 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 DCNP07585 359 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 CTSLP07711 333 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 SERPINA4P29622 427 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 CD86P42081 329 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 MPP3Q13368 585 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 TRIP13Q15645 432 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 GLE1Q53GS7 698 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 SPATA22Q8NHS9 363 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 OXNAD1Q96HP4 312 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 ZNF641Q96N77 438 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 RBM15Q96T37 977 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■□□□□ 9.1
PRKCSH-203ENST00000586486 RAB6BQ9NRW1 208 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 FAM153AQ9UHL3 310 aa17.15■□□□□ 0.34
PRKCSH-203ENST00000586486 GOLGA6CA6NDK9 693 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GOLGA6BA6NDN3 693 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 ERI2A8K979 691 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 HTRA2O43464 458 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 LEFTY1O75610 366 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 MT-CYBP00156 380 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GOLGA6DP0CG33 693 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 CA4P22748 312 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GEMP55040 296 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 BCL2L1Q07817 233 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GPS1Q13098 491 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 KDELC1Q6UW63 502 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GRIN3AQ8TCU5 1115 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 MLPHQ9BV36 600 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 TDRD1Q9BXT4 1180 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 POLMQ9NP87 494 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GOLGA6AQ9NYA3 693 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 ASIC3Q9UHC3 531 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 C1QTNF3-AMACRE9PGA6 284 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 TRAFD1O14545 582 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 PI15O43692 258 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 PAPSS2O95340 614 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 PIGNO95427 931 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 SLC34A2O95436 690 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GKP32189 559 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 MAGEA6P43360 314 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 VPS41P49754 854 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 SATB1Q01826 763 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 MTAPQ13126 283 aa17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 ZNF776Q68DI1 518 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-203ENST00000586486 GDPD4Q6W3E5 623 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms