RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CFAP57Q96MR6 1250 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 HAPLN3Q96S86 360 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 MBNL1Q9NR56 388 aaKnown RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 TMEM59LQ9UK28 342 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 DNAJC12Q9UKB3 198 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 KIF26BQ2KJY2 2108 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 PIEZO2Q9H5I5 2752 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 LMO7DNF2Z398 122 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 FAM72CH0Y354 149 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 YY2O15391 372 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 TSPAN6O43657 245 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 NOBOXO60393 691 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 F9P00740 461 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 TSHRP16473 764 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 KRT9P35527 623 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 SGCGQ13326 291 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 LINC00303Q3SY05 128 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 ZNF805Q5CZA5 627 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 C6orf132Q5T0Z8 1188 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 FAM102AQ5T9C2 384 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 FAM72AQ5TYM5 149 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 KCTD16Q68DU8 428 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 FAM72DQ6L9T8 149 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 FAM72BQ86X60 149 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 PHACTR4Q8IZ21 702 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 DENND6BQ8NEG7 585 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 TPCN2Q8NHX9 752 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 WDR36Q8NI36 951 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 ARHGEF2Q92974 986 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 ISG20Q96AZ6 181 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 TBATAQ96M53 351 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC3Q9BQI4 270 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 ZYG11BQ9C0D3 744 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 SYNCQ9H7C4 482 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 EVA1BQ9NVM1 165 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 NCKIPSDQ9NZQ3 722 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 PPARGC1AQ9UBK2 798 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 SPASTQ9UBP0 616 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 APOBEC3BQ9UH17 382 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
BRCA1-225ENST00000586385 STAP1Q9ULZ2 295 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC187A0A096LP49 1063 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 UGT2B4P06133 528 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 ITGA2BP08514 1039 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 ATXN7L2Q5T6C5 722 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-225ENST00000586385 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 FOXR1Q6PIV2 292 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 VPS36Q86VN1 386 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 KYQ8NBH2 561 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 NETO2Q8NC67 525 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 C18orf8Q96DM3 657 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 CLMPQ9H6B4 373 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 RWDD2AQ9UIY3 292 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 PADI4Q9UM07 663 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 SPTA1P02549 2419 aa12.06□□□□□ -0.48
BRCA1-225ENST00000586385 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 SLC28A2O43868 658 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 MMP20O60882 483 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 CYP11B1P15538 503 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 EIF4A3P38919 411 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 SNX16P57768 344 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 TCEA2Q15560 299 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 TGIF1Q15583 401 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 MYLK3Q32MK0 819 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 MIIPQ5JXC2 388 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 TAF3Q5VWG9 929 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 MACC1Q6ZN28 852 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 CCDC81Q6ZN84 652 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 NOP9Q86U38 636 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 EMC1Q8N766 993 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 TMEM35BQ8NCS4 154 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 OR2AP1Q8NGE2 309 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 PCDH19Q8TAB3 1148 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 BTN2A2Q8WVV5 523 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 NAT6Q93015 286 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 FUBP1Q96AE4 644 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 CCNL2Q96S94 520 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 KLC2Q9H0B6 622 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 ATXN7L1Q9ULK2 861 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-225ENST00000586385 FHOD1Q9Y613 1164 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 DOCK4Q8N1I0 1966 aa12.05□□□□□ -0.48
BRCA1-225ENST00000586385 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 D6RAR5 112 aa12.04□□□□□ -0.48
BRCA1-225ENST00000586385 KRIT1O00522 736 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms