RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SMARCD1Q96GM5 515 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PRICKLE1Q96MT3 831 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NEU3Q9UQ49 428 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DFFAO00273 331 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TFAP2AP05549 437 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC1A2P43004 574 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RPL5P46777 297 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DNAJB13P59910 316 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SH2D4BQ5SQS7 431 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 KLHL32Q96NJ5 620 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 IL12RB2Q99665 862 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NPAS2Q99743 824 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PKP2Q99959 881 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 GLOD4Q9HC38 313 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CSNK1G1Q9HCP0 422 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 UTP6Q9NYH9 597 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CDH9Q9ULB4 789 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 GNEQ9Y223 722 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TCAF1Q9Y4C2 921 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 OR6B1O95007 311 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CLPTM1O96005 669 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ADRA1AP35348 466 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TAS2R39P59534 338 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TRIM67Q6ZTA4 783 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ARHGAP12Q8IWW6 846 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ATPAF2Q8N5M1 289 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 C2CD4AQ8NCU7 369 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HEXDCQ8WVB3 486 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DGCR14Q96DF8 476 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC10A4Q96EP9 437 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TMA16Q96EY4 203 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MRM3Q9HC36 420 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ETAA1Q9NY74 926 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CLIC5Q9NZA1 410 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC2A6Q9UGQ3 507 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PCDHGB4Q9UN71 923 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SLC45A1Q9Y2W3 748 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
CDK5RAP3-237ENST00000585163 A0A087X1B8 175 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MEIS3P2A8K0S8 358 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 BTBD19C9JJ37 291 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ATP5F1P24539 256 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PSMD8P48556 350 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PTK2BQ14289 1009 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CHSY3Q70JA7 882 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SPATA24Q86W54 205 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 AHI1Q8N157 1196 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RNF34Q969K3 372 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ELMO2Q96JJ3 720 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 FICDQ9BVA6 458 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RHOBTB2Q9BYZ6 727 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 UNKQ9C0B0 810 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 POMKQ9H5K3 350 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PLK2Q9NYY3 685 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LZTS1Q9Y250 596 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HAS3O00219 553 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TRIM38O00635 465 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MAFKO60675 156 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CYP2C18P33260 490 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CD151P48509 253 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HSPA13P48723 471 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CLCNKBP51801 687 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 KPNA2P52292 529 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 POU4F1Q01851 419 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CNSTQ6PJW8 725 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TMEM102Q8N9M5 508 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DQX1Q8TE96 717 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NDNQ99608 321 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MRPL1Q9BYD6 325 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ZNF696Q9H7X3 374 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ENTPD7Q9NQZ7 604 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MRGBPQ9NV56 204 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PCDHGA7Q9Y5G6 932 aa14.34□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MYLKQ15746 1914 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MATN3O15232 486 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TNFAIP8O95379 198 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HNRNPLP14866 589 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PAMP19021 973 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RGS2P41220 211 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PSEN2P49810 448 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ATXN3P54252 364 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 GEMP55040 296 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MYBPC1Q00872 1141 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SULT2A1Q06520 285 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 EIF4EBP2Q13542 120 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZNF470Q6ECI4 717 aa14.33□□□□□ -0.12
CDK5RAP3-237ENST00000585163 KIAA0930Q6ICG6 404 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms