RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 INSIG1O15503 277 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 MAFKO60675 156 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 AHSGP02765 367 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 GLUD2P49448 558 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 PPM1FP49593 454 aaPredicted RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 ERVFC1P60507 584 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 NADSYN1Q6IA69 706 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 CGB2Q6NT52 195 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 PPHLN1Q8NEY8 458 aaKnown RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 UPF3AQ9H1J1 476 aaKnown RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 SLC40A1Q9NP59 571 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.74
RFFL-212ENST00000584655 PTGDR2Q9Y5Y4 395 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 V9GYQ6 96 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 EME2A4GXA9 379 aaPredicted RBP10.4□□□□□ -0.75
RFFL-212ENST00000584655 GCATO75600 419 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 FGF18O76093 207 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 SIX3O95343 332 aaPredicted RBP10.4□□□□□ -0.75
RFFL-212ENST00000584655 CCDC166P0CW27 439 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 PBLDP30039 288 aaPredicted RBP10.4□□□□□ -0.75
RFFL-212ENST00000584655 TAS2R39P59534 338 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 CDH17Q12864 832 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 NAPEPLDQ6IQ20 393 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 BBS7Q8IWZ6 715 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 SLCO2A1Q92959 643 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 NUDCD1Q96RS6 583 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 GPR63Q9BZJ6 419 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 NMUR2Q9GZQ4 415 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 SLCO3A1Q9UIG8 710 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.75
RFFL-212ENST00000584655 C5orf60A6NFR6 353 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 M0QZQ0 153 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 AIM2O14862 343 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 OR1I1O60431 355 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 KATNA1O75449 491 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 SUPT7LO94864 414 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ASMTLO95671 621 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ESRRAP11474 423 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 MPSTP25325 297 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 GGT5P36269 586 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 SLC1A2P43004 574 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 DSC1Q08554 894 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 GPR158Q5T848 1215 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 NEPROQ6NW34 567 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 GRASPQ7Z6J2 395 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 CRLF3Q8IUI8 442 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 APCDD1Q8J025 514 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 FBXO27Q8NI29 283 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 HDAC11Q96DB2 347 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 CCDC68Q9H2F9 335 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 GPAMQ9HCL2 828 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ARL2BPQ9Y2Y0 163 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 HMX2A2RU54 273 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 DCXO43602 365 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 STAU1O95793 577 aaKnown RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 FDFT1P37268 417 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 NAIF1Q69YI7 327 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 RNF31Q96EP0 1072 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 A6NNZ2 444 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 PPP6CO00743 305 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ENTPD5O75356 428 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 SORBS2O94875 1100 aaKnown RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 PRAMEF12O95522 483 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 KRT16P08779 473 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 HADHAP40939 763 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 VIPR2P41587 438 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 EPHB3P54753 998 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ECT2LQ008S8 904 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 GPR17Q13304 367 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 IHHQ14623 411 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 PCBP1Q15365 356 aaKnown RBP eCLIP10.39□□□□□ -0.75
RFFL-212ENST00000584655 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 ZNF648Q5T619 568 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 RFLNAQ6ZTI6 216 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 CEP97Q8IW35 865 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 C2orf73Q8N5S3 287 aaPredicted RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 MOSPD1Q9UJG1 213 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 USP3Q9Y6I4 520 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 NUMBLQ9Y6R0 609 aa10.39□□□□□ -0.75
RFFL-212ENST00000584655 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.39□□□□□ -0.75
RFFL-212ENST00000584655 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CRCPO75575 148 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 AP2A1O95782 977 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 GFAPP14136 432 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 PGAM1P18669 254 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 CES4AQ5XG92 561 aa10.38□□□□□ -0.75
RFFL-212ENST00000584655 DRICH1Q6PGQ1 229 aaPredicted RBP10.38□□□□□ -0.75
RFFL-212ENST00000584655 RTL3Q8N8U3 475 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms