RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	ABL2	P42684	1182 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RAD51	Q06609	339 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FGL2	Q14314	439 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	INO80D	Q53TQ3	878 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FIGN	Q5HY92	759 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DHRS13	Q6UX07	377 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	GCNT7	Q6ZNI0	430 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186		Q6ZSR6	202 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TTC7B	Q86TV6	843 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	OR13H1	Q8NG92	308 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CASKIN2	Q8WXE0	1202 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RAB7B	Q96AH8	199 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KCTD15	Q96SI1	283 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	NCAPG	Q9BPX3	1015 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	MRPL47	Q9HD33	250 aa	Known RBP	13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DONSON	Q9NYP3	566 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	UBA2	Q9UBT2	640 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DOCK9	Q9BZ29	2069 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186		A0A1W2PQJ5	194 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186		A6NNZ2	444 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186		J3KR12	359 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DFFA	O00273	331 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RAD51B	O15315	384 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	INSIG1	O15503	277 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TSPAN6	O43657	245 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	MYBL1	P10243	752 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	XPA	P23025	273 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PAPOLA	P51003	745 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	NDST2	P52849	883 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CYTH1	Q15438	398 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	NFKBIB	Q15653	356 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ZSCAN23	Q3MJ62	389 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ZNF542P	Q5EBM4	170 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RFX8	Q6ZV50	586 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TMPRSS7	Q7RTY8	843 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	VPS36	Q86VN1	386 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FNIP1	Q8TF40	1166 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SLC39A8	Q9C0K1	460 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LRRC19	Q9H756	370 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CAAP1	Q9H8G2	361 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KLHL11	Q9NVR0	708 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	IFNK	Q9P0W0	207 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	BZW2	Q9Y6E2	419 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	IGF2R	P11717	2491 aa		13.81	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ZFHX4	Q86UP3	3567 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	POM121B	A6NF01	834 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ARHGAP42	A6NI28	874 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	EIF3CL	B5ME19	914 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FPGT	O14772	594 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FFAR2	O15552	330 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LRCH4	O75427	683 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DKK1	O94907	266 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PIGN	O95427	931 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SERPING1	P05155	500 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ERCC2	P18074	760 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ITIH2	P19823	946 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PTMS	P20962	102 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PBX1	P40424	430 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SMTNL2	Q2TAL5	461 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	HGSNAT	Q68CP4	663 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ABI3BP	Q7Z7G0	1075 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SLC22A18AS	Q8N1D0	253 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	GALNT15	Q8N3T1	639 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	HSPH1	Q92598	858 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	VOPP1	Q96AW1	172 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ARHGEF26	Q96DR7	871 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	BMF	Q96LC9	184 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	EIF3C	Q99613	913 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	WRAP53	Q9BUR4	548 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ISCU	Q9H1K1	167 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ZWILCH	Q9H900	591 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	UCKL1	Q9NWZ5	548 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DNAJC28	Q9NX36	388 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LHX3	Q9UBR4	397 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	IPO11	Q9UI26	975 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CAPN11	Q9UMQ6	739 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LUC7L2	Q9Y383	392 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	HS3ST3A1	Q9Y663	406 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CHD5	Q8TDI0	1954 aa		13.8	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SPINT1	O43278	529 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PRAMEF11	O60813	436 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	MMP20	O60882	483 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RFPL3	O75679	317 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PALM	O75781	387 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DGKA	P23743	735 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CLDN6	P56747	220 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ZBED6	P86452	979 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	HS1BP3	Q53T59	392 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CFAP58	Q5T655	872 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KYAT3	Q6YP21	454 aa	Known RBP	13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KDM7A	Q6ZMT4	941 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KANSL1	Q7Z3B3	1105 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SLC25A45	Q8N413	288 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	NPW	Q8N729	165 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PAF1	Q8N7H5	531 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CXorf40A	Q8TE69	158 aa		13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SYN2	Q92777	582 aa	Predicted RBP	13.79	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	C1QTNF2	Q9BXJ5	285 aa		13.79	□□□□□ -0.2

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