RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CA4P22748 312 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 PSMB4P28070 264 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 RPL22P35268 128 aaKnown RBP11.8□□□□□ -0.52
CDRT1-207ENST00000583965 WASP42768 502 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 RGRP47804 291 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 CLCN5P51795 746 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 NRLP54845 237 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 GEMP55040 296 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 DSC2Q02487 901 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
CDRT1-207ENST00000583965 C8orf74Q6P047 294 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 NCEH1Q6PIU2 408 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 Q6ZS52 159 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 JAMLQ86YT9 394 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 KLHDC8BQ8IXV7 354 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 RYBPQ8N488 228 aaPredicted RBP11.8□□□□□ -0.52
CDRT1-207ENST00000583965 SPEM1Q8N4L4 309 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ZNF366Q8N895 744 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 GLIS1Q8NBF1 620 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 TMIEQ8NEW7 156 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ARRDC2Q8TBH0 407 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 RUBCNQ92622 972 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 TADA1Q96BN2 335 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 LRRC45Q96CN5 670 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 EXOC2Q96KP1 924 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 OSBPL1AQ9BXW6 950 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ATP13A3Q9H7F0 1226 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 NOD2Q9HC29 1040 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ZDHHC4Q9NPG8 344 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 IL36AQ9UHA7 158 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 FAM153AQ9UHL3 310 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 EVLQ9UI08 416 aaPredicted RBP11.8□□□□□ -0.52
CDRT1-207ENST00000583965 AAR2Q9Y312 384 aaKnown RBP11.8□□□□□ -0.52
CDRT1-207ENST00000583965 TRPM6Q9BX84 2022 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 KMT2EQ8IZD2 1858 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 A0A1W2PQ67 120 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 A0A1W2PQF6 199 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ERI2A8K979 691 aaKnown RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 C1QTNF3-AMACRE9PGA6 284 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 NDC80O14777 642 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 TTI1O43156 1089 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RAD51CO43502 376 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RNASEH1O60930 286 aaKnown RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 SOCS5O75159 536 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 MMP2P08253 660 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ZSCAN5DPP0CG00 497 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 AOC1P19801 751 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 SERPINA4P29622 427 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 CD86P42081 329 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 DGKEP52429 567 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 BCL2L1Q07817 233 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 NIPAL4Q0D2K0 466 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 GPS1Q13098 491 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 MPP3Q13368 585 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 CRY1Q16526 586 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 TEX35Q5T0J7 233 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 CCDC70Q6NSX1 233 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 BMP8AQ7Z5Y6 402 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 STK40Q8N2I9 435 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 OR2T3Q8NH03 318 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 HCAR2Q8TDS4 363 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ZNF641Q96N77 438 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RBM15Q96T37 977 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 FAM129BQ96TA1 746 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RAB17Q9H0T7 212 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RSPH9Q9H1X1 276 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 MTG2Q9H4K7 406 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ZDHHC6Q9H6R6 413 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 RAB6BQ9NRW1 208 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
CDRT1-207ENST00000583965 UTP11Q9Y3A2 253 aaKnown RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-207ENST00000583965 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 LEFTY1O75610 366 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 METTL18O95568 372 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 ADH1BP00325 375 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 DCNP07585 359 aaKnown RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 TNNT3P45378 269 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SKOR1P84550 965 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 CDK16Q00536 496 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SEMA5AQ13591 1074 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 GAS6Q14393 721 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 TRIP13Q15645 432 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 ELF2Q15723 593 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 FAM46CQ5VWP2 391 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 KIAA1211LQ6NV74 962 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 CHST14Q8NCH0 376 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms