RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DPY19L3Q6ZPD9 716 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 RD3Q7Z3Z2 195 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 SPRED1Q7Z699 444 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 TICAM1Q8IUC6 712 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 FAM114A1Q8IWE2 563 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 CHST14Q8NCH0 376 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 AGBL5Q8NDL9 886 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 KIAA1524Q8TCG1 905 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 CXorf40AQ8TE69 158 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 CENPTQ96BT3 561 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 TEFMQ96QE5 360 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 RP1P56715 2156 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 A1L4Q6 167 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 RAD1O60671 282 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 MT-CO1P00395 513 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 TCN2P20062 427 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 GNLYP22749 145 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 RRM1P23921 792 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
CASC3-208ENST00000583649 PEX6Q13608 980 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 DEFB109BQ30KR1 87 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 EDRF1Q3B7T1 1238 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 CRTC2Q53ET0 693 aaPredicted RBP11.29□□□□□ -0.6
CASC3-208ENST00000583649 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 TCTN3Q6NUS6 607 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 TMEM270Q6UE05 265 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 ENPP7Q6UWV6 458 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 LRRC31Q6UY01 552 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 KDELC2Q7Z4H8 507 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 SLITRK4Q8IW52 837 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 NLGN4XQ8N0W4 816 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 RYBPQ8N488 228 aaPredicted RBP11.29□□□□□ -0.6
CASC3-208ENST00000583649 LINC00301Q8NCQ3 95 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 FAM46DQ8NEK8 389 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 NLGN4YQ8NFZ3 816 aaPredicted RBP11.29□□□□□ -0.6
CASC3-208ENST00000583649 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 PRMT1Q99873 361 aaKnown RBP11.29□□□□□ -0.6
CASC3-208ENST00000583649 DPYSL5Q9BPU6 564 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 OSBPL1AQ9BXW6 950 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 TNKS2Q9H2K2 1166 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 TMEM51Q9NW97 253 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 DDIT4Q9NX09 232 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 SLC39A1Q9NY26 324 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 KLQ9UEF7 1012 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 VPS51Q9UID3 782 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 OR51B4Q9Y5P0 310 aa11.29□□□□□ -0.6
CASC3-208ENST00000583649 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 CASC3O15234 703 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 INPP4BO15327 924 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 ENDOD1O94919 500 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 FYNP06241 537 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 CASP1P29466 404 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 SRP54P61011 504 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 POLD3Q15054 466 aaPredicted RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 ZNF805Q5CZA5 627 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 TCERG1LQ5VWI1 586 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 FAM173BQ6P4H8 233 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 CPT1CQ8TCG5 803 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 ZPBPQ9BS86 351 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 SLC29A3Q9BZD2 475 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 SEMA6CQ9H3T2 930 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 ZDHHC6Q9H6R6 413 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 PHTF1Q9UMS5 762 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 TP53TG5Q9Y2B4 290 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 PCDHB4Q9Y5E5 795 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 ZFC3H1O60293 1989 aaKnown RBP11.28□□□□□ -0.6
CASC3-208ENST00000583649 DOCK9Q9BZ29 2069 aa11.28□□□□□ -0.6
CASC3-208ENST00000583649 NBPF19A0A087WUL8 3843 aa11.27□□□□□ -0.6
CASC3-208ENST00000583649 TRPM6Q9BX84 2022 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 SYNJ2BP-COX16A0A087WUM0 186 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 C16orf96A6NNT2 1141 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 K7ERQ8 282 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 NKX2-8O15522 239 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 MED7O43513 233 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 YEATS4O95619 227 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms