RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	IL1B	P01584	269 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ASL	P04424	464 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	CCNYL3	P0C7X3	344 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	TRIM49	P0CI25	452 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	TRIM49C	P0CI26	452 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	CXCL8	P10145	99 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	PABPC1	P11940	636 aa	Known RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	SNRPB	P14678	240 aa	Known RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	YWHAQ	P27348	245 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ARCN1	P48444	511 aa	Known RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	PSEN1	P49768	467 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	VAV2	P52735	878 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	METAP1	P53582	386 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ST8SIA6	P61647	398 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	CNTN1	Q12860	1018 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	AAMP	Q13685	434 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	PPP2R5A	Q15172	486 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	EPHA7	Q15375	998 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	HYAL4	Q2M3T9	481 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	VAX1	Q5SQQ9	334 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	PIP5KL1	Q5T9C9	394 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	TMEM71	Q6P5X7	295 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	MACC1	Q6ZN28	852 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	TMTC3	Q6ZXV5	915 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ZNF654	Q8IZM8	581 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	CLYBL	Q8N0X4	340 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	TMEM86A	Q8N2M4	240 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	PDCL2	Q8N4E4	241 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ARFGAP1	Q8N6T3	406 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	DEPTOR	Q8TB45	409 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ZNF592	Q92610	1267 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	SDCCAG3	Q96C92	435 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	KLF6	Q99612	283 aa	Predicted RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ZBTB20	Q9HC78	741 aa	Predicted RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	COQ3	Q9NZJ6	369 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	LPAR3	Q9UBY5	353 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	ZFR2	Q9UPR6	939 aa	Known RBP	5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	WASF2	Q9Y6W5	498 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	HECTD4	Q9Y4D8	3996 aa		5.05	□□□□□ -1.6
MSI2-216	ENST00000582772	CHD5	Q8TDI0	1954 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	ERICH2	A1L162	156 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	KPNA7	A9QM74	516 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772		E9PLN8	166 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772		F8VP50	259 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	TOR1B	O14657	336 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	IFIT3	O14879	490 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	TMPRSS2	O15393	492 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	STC2	O76061	302 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	SOX30	O94993	753 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	KLKB1	P03952	638 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	UNG	P13051	313 aa	Predicted RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	POLR2E	P19388	210 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	BDNF	P23560	247 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	HK3	P52790	923 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	OR1D5	P58170	312 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	RPS18	P62269	152 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	YPEL5	P62699	121 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	PPARD	Q03181	441 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	CENPC	Q03188	943 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	PPP2R3A	Q06190	1150 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	RAPSN	Q13702	412 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	TLR1	Q15399	786 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	MAPRE1	Q15691	268 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	AMZ1	Q400G9	498 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	FAM46C	Q5VWP2	391 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	MOXD1	Q6UVY6	613 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	STK40	Q8N2I9	435 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	C3orf56	Q8N813	242 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	DENND6B	Q8NEG7	585 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	MYRIP	Q8NFW9	859 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	LILRB4	Q8NHJ6	448 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	KLK6	Q92876	244 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	FBXO32	Q969P5	355 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	MYLPF	Q96A32	169 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	SPAG5	Q96R06	1193 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	TAAR6	Q96RI8	345 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	VKORC1	Q9BQB6	163 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	MRPL4	Q9BYD3	311 aa	Known RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	TTYH3	Q9C0H2	523 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	NACA2	Q9H009	215 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	ZMYND12	Q9H0C1	365 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	RWDD1	Q9H446	243 aa	Predicted RBP	5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	ABCB8	Q9NUT2	735 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	RGL1	Q9NZL6	768 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	ABI3	Q9P2A4	366 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	SEC14L3	Q9UDX4	400 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772	SCN2A	Q99250	2005 aa		5.04	□□□□□ -1.6
MSI2-216	ENST00000582772		A8MV72	311 aa	Predicted RBP	5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	FPGT	O14772	594 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	RAD51B	O15315	384 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	HMMR	O75330	724 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	PMPCB	O75439	489 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	SLITRK3	O94933	977 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	GOSR1	O95249	250 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	MATN4	O95460	622 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	SRPRA	P08240	638 aa	Known RBP	5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	CLTA	P09496	248 aa		5.03	□□□□□ -1.6
MSI2-216	ENST00000582772	XRCC6	P12956	609 aa	Known RBP eCLIP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms