RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 RFTN1Q14699 578 aaPredicted RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 PDK1Q15118 436 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 RBM12BQ8IXT5 1001 aaKnown RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 CNBD2Q96M20 576 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 UROC1Q96N76 676 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 ILKAPQ9H0C8 392 aaPredicted RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 SEPT10Q9P0V9 454 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 CXCR3P49682 368 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 CRADDP78560 199 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 CLLU1OSQ5K130 101 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 ZNF280BQ86YH2 543 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 DCLK2Q8N568 766 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 NPWQ8N729 165 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 CERS2Q96G23 380 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 CDRT15Q96T59 188 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 PRPF18Q99633 342 aaKnown RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 RBBP8Q99708 897 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 RGS18Q9NS28 235 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
GGA3-214ENST00000582717 SQORQ9Y6N5 450 aa13.8□□□□□ -0.2
GGA3-214ENST00000582717 G3V2L1 256 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 MATN2O00339 956 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 HDAC3O15379 428 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 PFDN1O60925 122 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 BCAS2O75934 225 aaPredicted RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 DDHD2O94830 711 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 ME2P23368 584 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 PSMB4P28070 264 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 SERPINB5P36952 375 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 LIMK2P53671 638 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 ZNF567Q8N184 647 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 MAPK15Q8TD08 544 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 OR52B2Q96RD2 323 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 TKTL2Q9H0I9 626 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 RAP2CQ9Y3L5 183 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 SLCO1B7G3V0H7 640 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 TADA2AO75478 443 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 OR4Q2P0C623 313 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 CDK4P11802 303 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 ATP6V1B1P15313 513 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 XRCC1P18887 633 aaPredicted RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 SEL1L3Q68CR1 1132 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 CLEC14AQ86T13 490 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 DQX1Q8TE96 717 aaKnown RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 PDCD6IPQ8WUM4 868 aaKnown RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 CAPNS2Q96L46 248 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
GGA3-214ENST00000582717 SYBUQ9NX95 663 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 VTI1BQ9UEU0 232 aa13.79□□□□□ -0.2
GGA3-214ENST00000582717 KCNK1O00180 336 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 TRMUO75648 421 aaKnown RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 TYMPP19971 482 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 TSPY1Q01534 308 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 SULT2A1Q06520 285 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 SCML4Q8N228 414 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 DIS3LQ8TF46 1054 aaKnown RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 GAB3Q8WWW8 586 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 ZNF385DQ9H6B1 395 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 AK5Q9Y6K8 562 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 MYO16Q9Y6X6 1858 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 SHROOM3Q8TF72 1996 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 A0A0J9YVX5 310 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 F9P00740 461 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 HCAR3P49019 387 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 PGFP49763 221 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
GGA3-214ENST00000582717 DSC1Q08554 894 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 TNS4Q8IZW8 715 aa13.78□□□□□ -0.2
GGA3-214ENST00000582717 NUP93Q8N1F7 819 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms