RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MPOP05164 745 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 MYF5P13349 255 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 EEF1GP26641 437 aaKnown RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 ABL2P42684 1182 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 PDE1CQ14123 709 aaPredicted RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 POLD3Q15054 466 aaPredicted RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 MYLK3Q32MK0 819 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 CCDC14Q49A88 953 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 RAB6CQ53S08 254 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 HSP90AA4PQ58FG1 418 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 TCP11X2Q5H9J9 407 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 CT47A1Q5JQC4 288 aaPredicted RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 FAM72AQ5TYM5 149 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 NAA35Q5VZE5 725 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 FAM72DQ6L9T8 149 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 IGF2-ASQ6U949 168 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 FAM72BQ86X60 149 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 DENND6BQ8NEG7 585 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 OR2AP1Q8NGE2 309 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 TPCN2Q8NHX9 752 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 RXFP2Q8WXD0 754 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 CENPIQ92674 756 aaPredicted RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 CENPTQ96BT3 561 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 ARHGEF26Q96DR7 871 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 TM6SF2Q9BZW4 377 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 RAB6CQ9H0N0 254 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 ZDHHC6Q9H6R6 413 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 SAMSN1Q9NSI8 373 aaKnown RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 TMEM248Q9NWD8 314 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 NOCTQ9UK39 431 aaKnown RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 HPCAL4Q9UM19 191 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 FAM170AA1A519 330 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 EME2A4GXA9 379 aaPredicted RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 C2CD4BA6NLJ0 364 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 KRIT1O00522 736 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 NEMP1O14524 444 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 AQP9O43315 295 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 KDELR3O43731 214 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 LRIG2O94898 1065 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 JUNDP17535 347 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 CHRNB2P17787 502 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 TGM2P21980 687 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 SDC4P31431 198 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 GKP32189 559 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 PTPN9P43378 593 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 SNRPD1P62314 119 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 YPEL5P62699 121 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 GABREP78334 506 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 CDR2Q01850 454 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 EIF2B5Q13144 721 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 ISXQ2M1V0 245 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 C15orf59Q2T9L4 293 aaPredicted RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 TPRG1LQ5T0D9 272 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 RWDD4Q6NW29 188 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 STRADAQ7RTN6 431 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 RYBPQ8N488 228 aaPredicted RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 OR6K2Q8NGY2 324 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 IFI44Q8TCB0 444 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 MAPK15Q8TD08 544 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 SLC20A1Q8WUM9 679 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 BTN2A2Q8WVV5 523 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 MED8Q96G25 268 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 OSBPL1AQ9BXW6 950 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 MAGEB5Q9BZ81 275 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 SEMA4CQ9C0C4 833 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
RFFL-209ENST00000581265 IL17BQ9UHF5 180 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 NEU3Q9UQ49 428 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 KALRNO60229 2985 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
RFFL-209ENST00000581265 CPED1A4D0V7 1026 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 ZSCAN5CA6NGD5 496 aaPredicted RBP10.75□□□□□ -0.69
RFFL-209ENST00000581265 TOR1BO14657 336 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 RAMP2O60895 175 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 UGT2B4P06133 528 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 PLEKP08567 350 aaPredicted RBP10.75□□□□□ -0.69
RFFL-209ENST00000581265 HDAC4P56524 1084 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 FMO1Q01740 532 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 PTP4A2Q12974 167 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 PTK2BQ14289 1009 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 CDKN3Q16667 212 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 CDO1Q16878 200 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 INO80DQ53TQ3 878 aaPredicted RBP10.75□□□□□ -0.69
RFFL-209ENST00000581265 COLEC12Q5KU26 742 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 TTC7BQ86TV6 843 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 JOSD2Q8TAC2 188 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 GPT2Q8TD30 523 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 LMX1AQ8TE12 382 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 CASKIN2Q8WXE0 1202 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 NTAN1Q96AB6 310 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 TBATAQ96M53 351 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 KLHL32Q96NJ5 620 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms