RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 MAPK8P45983 427 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 RGRP47804 291 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 SLC6A11P48066 632 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 GPX6P59796 221 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 AP1S1P61966 158 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 CDK18Q07002 472 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 SMAD4Q13485 552 aaKnown RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 IHHQ14623 411 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 CCDC85BQ15834 202 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 GEN1Q17RS7 908 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 UBAP2Q5T6F2 1119 aaKnown RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 ARMC3Q5W041 872 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 CASC4Q6P4E1 433 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 NCEH1Q6PIU2 408 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 C3orf62Q6ZUJ4 267 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 AGGF1Q8N302 714 aaeCLIP11.17□□□□□ -0.62
SKA2-206ENST00000581068 MPP5Q8N3R9 675 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 SH2D3CQ8N5H7 860 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 CDX2Q99626 313 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 WDR83Q9BRX9 315 aaKnown RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 TMEM109Q9BVC6 243 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 CEP44Q9C0F1 390 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 IL22Q9GZX6 179 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 SYBUQ9NX95 663 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 SAMD15Q9P1V8 674 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 ERVW-1Q9UQF0 538 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 ARIH1Q9Y4X5 557 aaPredicted RBP11.17□□□□□ -0.62
SKA2-206ENST00000581068 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
SKA2-206ENST00000581068 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 TRIM24O15164 1050 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 MBTPS2O43462 519 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 NDST3O95803 873 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 GSRP00390 522 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 SHBGP04278 402 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 IVLP07476 585 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 SRPRAP08240 638 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 TPH1P17752 444 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PGAM1P18669 254 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 HLA-DPA1P20036 260 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 KCNA5P22460 613 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 CA4P22748 312 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 SSTR1P30872 391 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 NNMTP40261 264 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 STK19P49842 368 aaPredicted RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 SNRPD1P62314 119 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 ZNF844Q08AG5 666 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 HTR4Q13639 388 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 ITPRIPL2Q3MIP1 535 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PREPLQ4J6C6 727 aaPredicted RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 HSP90B2PQ58FF3 399 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PCID2Q5JVF3 399 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 CEP85LQ5SZL2 805 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 CERCAMQ5T4B2 595 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 ATXN7L2Q5T6C5 722 aaPredicted RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 CAPN12Q6ZSI9 719 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 KDELC2Q7Z4H8 507 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 C12orf40Q86WS4 652 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 SLC25A41Q8N5S1 370 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PCDH20Q8N6Y1 951 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 EXOC2Q96KP1 924 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 RPL10LQ96L21 214 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 RPP25Q9BUL9 199 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 BRD9Q9H8M2 597 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 PIH1D1Q9NWS0 290 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 SLC8A2Q9UPR5 921 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 NUMBLQ9Y6R0 609 aa11.16□□□□□ -0.62
SKA2-206ENST00000581068 MYO18AQ92614 2054 aaKnown RBP11.16□□□□□ -0.62
SKA2-206ENST00000581068 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.62
SKA2-206ENST00000581068 FAM237BA0A1B0GVD1 139 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 OTOL1A6NHN0 477 aaPredicted RBP11.15□□□□□ -0.62
SKA2-206ENST00000581068 GOLGA6L10A6NI86 522 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 ATP9BO43861 1147 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 GJB3O75712 270 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 TCEA3O75764 348 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 FGF1P05230 155 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 POLBP06746 335 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 ALADP13716 330 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 FOSL2P15408 326 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 ADRA1DP25100 572 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 STX2P32856 288 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 GJA4P35212 333 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 OPRD1P41143 372 aa11.15□□□□□ -0.62
SKA2-206ENST00000581068 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.62
SKA2-206ENST00000581068 CHRNA4P43681 627 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms