RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PDCD6IPQ8WUM4 868 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 CENPTQ96BT3 561 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 FEM1CQ96JP0 617 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 TAAR9Q96RI9 348 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 PRMT1Q99873 361 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 FEM1AQ9BSK4 669 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC13A1Q9BZW2 595 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 SPRY4Q9C004 299 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 CISHQ9NSE2 258 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 CGNQ9P2M7 1197 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 GGT7Q9UJ14 662 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC25A13Q9UJS0 675 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 TLR6Q9Y2C9 796 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 B3GALT1Q9Y5Z6 326 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 KCNMB2Q9Y691 235 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 WASF2Q9Y6W5 498 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 MED13LQ71F56 2210 aa7.82□□□□□ -1.16
SMARCE1-217ENST00000580654 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CROCCQ5TZA2 2017 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TTLL8A6PVC2 850 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 IKBKBO14920 756 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SPTLC2O15270 562 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SMAD6O43541 496 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 ZNF821O75541 412 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 LEFTY1O75610 366 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 LTFP02788 710 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 ADRB3P13945 408 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CASP1P29466 404 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 NEK3P51956 506 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 B4GALNT1Q00973 533 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CENPCQ03188 943 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 PPP3CAQ08209 521 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CCDC15Q0P6D6 951 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 BST2Q10589 180 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 PTK2BQ14289 1009 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 KNOP1Q1ED39 458 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CERCAMQ5T4B2 595 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 KCTD16Q68DU8 428 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CNNM4Q6P4Q7 775 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 MACC1Q6ZN28 852 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 ASB18Q6ZVZ8 466 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TAC4Q86UU9 113 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 CHSY1Q86X52 802 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC9A9Q8IVB4 645 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 UNC5BQ8IZJ1 945 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SIX6OS1Q8N1H7 587 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 FSTL5Q8N475 847 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 PDILTQ8N807 584 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 DENND6BQ8NEG7 585 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 OR6C4Q8NGE1 309 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 GRIN3AQ8TCU5 1115 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SEMA4DQ92854 862 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 PSMB7Q99436 277 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 EDEM3Q9BZQ6 932 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TNMDQ9H2S6 317 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 RDH14Q9HBH5 336 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC39A2Q9NP94 309 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 DYRK4Q9NR20 520 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 DKK3Q9UBP4 350 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 GPR34Q9UPC5 381 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 HS3ST2Q9Y278 367 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 ITM2BQ9Y287 266 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 ANKRD36A6QL64 1941 aa7.81□□□□□ -1.16
SMARCE1-217ENST00000580654 TCAF2A6NFQ2 919 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TCP11X1B4DZS4 312 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 H3BQV1 296 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 B4GAT1O43505 415 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 AP1G1O43747 822 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 SNAP91O60641 907 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PRNPP04156 253 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TRIM49P0CI25 452 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TRIM49CP0CI26 452 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PNLIPP16233 465 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 GLB1P16278 677 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 RRM1P23921 792 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 BRD2P25440 801 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 EIF4A3P38919 411 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 TXLNAP40222 546 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ABL2P42684 1182 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 GCLMP48507 274 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 RGS7P49802 495 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 HK3P52790 923 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 THOP1P52888 689 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 SLC8A3P57103 927 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 YPEL5P62699 121 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PPARDQ03181 441 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 NNTQ13423 1086 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ELOCQ15369 112 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ALG11Q2TAA5 492 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PRR30Q53SZ7 412 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 ZC3H12AQ5D1E8 599 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 PMF1Q6P1K2 205 aa7.8□□□□□ -1.16
SMARCE1-217ENST00000580654 OGFOD3Q6PK18 319 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms