RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DPY19L3Q6ZPD9 716 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 GKN2Q86XP6 184 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 FAM46DQ8NEK8 389 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 TMIEQ8NEW7 156 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 TAS1R2Q8TE23 839 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 AZIN2Q96A70 460 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 TBATAQ96M53 351 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 LENG8Q96PV6 779 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 HAPLN3Q96S86 360 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 FEM1AQ9BSK4 669 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 DDA1Q9BW61 102 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 NIF3L1Q9GZT8 377 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 IL36AQ9UHA7 158 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 TSPAN16Q9UKR8 245 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 WASF2Q9Y6W5 498 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 TNRC6AQ8NDV7 1962 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 NEMP1O14524 444 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 GKP32189 559 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 AP3M2P53677 418 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 SLC8A3P57103 927 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 CCDC15Q0P6D6 951 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 C14orf28Q4W4Y0 310 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 DCAF12Q5T6F0 453 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 CEP135Q66GS9 1140 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 ENPP7Q6UWV6 458 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 TAC4Q86UU9 113 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 PDILTQ8N807 584 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 Q8NA96 180 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 TAF4BQ92750 862 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 CENPTQ96BT3 561 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 PDXPQ96GD0 296 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 CYP3A43Q9HB55 503 aa14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.122e-8■■□□□ 13.7
CSNK1D-213ENST00000580446 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-213ENST00000580446 F5H5T6 163 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 HGSO14964 777 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 FYNP06241 537 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 TRIM49P0CI25 452 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 TRIM49CP0CI26 452 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 ITIH2P19823 946 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 CSF2RBP32927 897 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 PLK1P53350 603 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 PMS2P54278 862 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 MC1RQ01726 317 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 SLC12A1Q13621 1099 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 CPZQ66K79 652 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 LVRNQ6Q4G3 990 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 OR6C4Q8NGE1 309 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 CCL4L1Q8NHW4 92 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 RTP4Q96DX8 246 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 SLC39A13Q96H72 371 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 SLC29A3Q9BZD2 475 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 SPRY4Q9C004 299 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 MIS12Q9H081 205 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 APMAPQ9HDC9 416 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 OR51B4Q9Y5P0 310 aa14.27□□□□□ -0.13
CSNK1D-213ENST00000580446 TRPM6Q9BX84 2022 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 PRSS44E7EML9 344 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 MMP20O60882 483 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 KATNA1O75449 491 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 STK17BO94768 372 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 RASGRP1O95267 797 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 LTFP02788 710 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 MAP4P27816 1152 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 CD1CP29017 333 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 CASP1P29466 404 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 GCLMP48507 274 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 DNA2P51530 1060 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 PGDP52209 483 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 PITX1P78337 314 aaPredicted RBP14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 IRF4Q15306 451 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 ZNF438Q7Z4V0 828 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 TAF8Q7Z7C8 310 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 AGBL5Q8NDL9 886 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 CCDC112Q8NEF3 446 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 RANBP9Q96S59 729 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 PSMB7Q99436 277 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 ASPSCR1Q9BZE9 553 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 MUC3BQ9H195 1237 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 DPEP2Q9H4A9 486 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 POLHQ9Y253 713 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 OR1A2Q9Y585 309 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 SVILO95425 2214 aa14.26□□□□□ -0.13
CSNK1D-213ENST00000580446 A8MU76 341 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 CBX6O95503 412 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SRP54P61011 504 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 BST2Q10589 180 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms