RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 OSGIN2Q9Y236 505 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ZBTB1Q9Y2K1 713 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TRPV2Q9Y5S1 764 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 HECW1Q76N89 1606 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SPAG9O60271 1321 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 EP400Q96L91 3159 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 TRAV34A0A0B4J273 112 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ARHGEF37A1IGU5 675 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 LRRD1A4D1F6 860 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MANSC4A6NHS7 340 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MBD3L5A6NJ08 208 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SYN3O14994 580 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PRPF4O43172 522 aaKnown RBP eCLIP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 HOXA3O43365 443 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PRPSAP2O60256 369 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 NOL3O60936 208 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 STAM2O75886 525 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 FTCDO95954 541 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 POMCP01189 267 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 URODP06132 367 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ABCB1P08183 1280 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CYP21A2P08686 494 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 DLDP09622 509 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SNRPA1P09661 255 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ALADP13716 330 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SELLP14151 372 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PTAFRP25105 342 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ICAM3P32942 547 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 RFC1P35251 1148 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CPOXP36551 454 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 GSTM5P46439 218 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 DGKEP52429 567 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 STAT2P52630 851 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PRKAG1P54619 331 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 C1QTNF8P60827 252 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 RBM6P78332 1123 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 OLR1P78380 273 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 RNASELQ05823 741 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CAMK2DQ13557 499 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 THOC5Q13769 683 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 KLF9Q13886 244 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 BAATQ14032 418 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CLCA4Q14CN2 919 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PCLAFQ15004 111 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ETFDHQ16134 617 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ANKDD1AQ495B1 522 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CRY2Q49AN0 593 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 LRRC24Q50LG9 513 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 KRBOX4Q5JUW0 171 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF626Q68DY1 528 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CAVIN1Q6NZI2 390 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF529Q6P280 563 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 WDR73Q6P4I2 378 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 Q6ZNX1 250 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CCDC73Q6ZRK6 1079 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MSANTD1Q6ZTZ1 278 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PPP1R32Q7Z5V6 425 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 RHPN2Q8IUC4 686 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 WDR63Q8IWG1 891 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 OTUD6BQ8N6M0 293 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 FITM2Q8N6M3 262 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 OR5M3Q8NGP4 307 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CTCFLQ8NI51 663 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 NEK9Q8TD19 979 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 ZFAND2BQ8WV99 257 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 INTS12Q96CB8 462 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PERPQ96FX8 193 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 WBP1Q96G27 269 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PDLIM2Q96JY6 352 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 FER1L6-AS2Q96M78 137 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 AK8Q96MA6 479 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SLC46A1Q96NT5 459 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MAP7D2Q96T17 732 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SPXQ9BT56 116 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 IMPG2Q9BZV3 1241 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 TTYH3Q9C0H2 523 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 C1orf21Q9H246 121 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MROH8Q9H579 483 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 TTC12Q9H892 705 aaPredicted RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 LTB4R2Q9NPC1 389 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SNX15Q9NRS6 342 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SPATS2LQ9NUQ6 558 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 DDX43Q9NXZ2 648 aaKnown RBP3.26□□□□□ -1.89
KPNB1-208ENST00000580019 FAM30AQ9NZY2 134 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 LRIT1Q9P2V4 623 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 DNAJB9Q9UBS3 223 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CD207Q9UJ71 328 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CDH22Q9UJ99 828 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 TUBE1Q9UJT0 475 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 AGAP1Q9UPQ3 857 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 MTMR6Q9Y217 621 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 CDYLQ9Y232 598 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 LIPT1Q9Y234 373 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 NEU2Q9Y3R4 380 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 PCDHA10Q9Y5I2 948 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 SESN1Q9Y6P5 492 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 UTRNP46939 3433 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 RGS12O14924 1447 aa3.26□□□□□ -1.89
KPNB1-208ENST00000580019 NPATQ14207 1427 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms