RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 GLB1P16278 677 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 ITIH2P19823 946 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 CASP1P29466 404 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 GKP32189 559 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 SULT2A1Q06520 285 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 CHAF1BQ13112 559 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 ERV3-1Q14264 604 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 ELOCQ15369 112 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 CPZQ66K79 652 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 SP5Q6BEB4 398 aaPredicted RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 FOXR2Q6PJQ5 311 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 DPY19L3Q6ZPD9 716 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 FAM129CQ86XR2 697 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 CCDC65Q8IXS2 484 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 NRSN1Q8IZ57 195 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 FSTL5Q8N475 847 aaPredicted RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 BMPERQ8N8U9 685 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 TTC13Q8NBP0 860 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 RTP4Q96DX8 246 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 FEM1CQ96JP0 617 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 PRMT1Q99873 361 aaKnown RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 DDA1Q9BW61 102 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 IL36AQ9UHA7 158 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
GGA3-206ENST00000578773 KCTD3Q9Y597 815 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 ACTL7AQ9Y615 435 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 POLEQ07864 2286 aa11.24□□□□□ -0.61
GGA3-206ENST00000578773 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 CPNE6O95741 557 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 CALCAP01258 141 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 LTFP02788 710 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 TRIM49P0CI25 452 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 TRIM49CP0CI26 452 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 CTSEP14091 401 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 SGCGQ13326 291 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 IRF4Q15306 451 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 C14orf28Q4W4Y0 310 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 ZC3H12AQ5D1E8 599 aaKnown RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 PIM3Q86V86 326 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 TP53I13Q8NBR0 393 aaPredicted RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 TAF4BQ92750 862 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 KIAA1143Q96AT1 154 aaPredicted RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 DDX50Q9BQ39 737 aaKnown RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.23□□□□□ -0.61
GGA3-206ENST00000578773 CLIC4Q9Y696 253 aa11.23□□□□□ -0.61
GGA3-206ENST00000578773 MAP1AP78559 2803 aaPredicted RBP11.23□□□□□ -0.61
GGA3-206ENST00000578773 HGSO14964 777 aaPredicted RBP11.22□□□□□ -0.61
GGA3-206ENST00000578773 CBX6O95503 412 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 PRNPP04156 253 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 RPN1P04843 607 aaKnown RBP11.22□□□□□ -0.61
GGA3-206ENST00000578773 ALPIP09923 528 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 CD1CP29017 333 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 ALDH4A1P30038 563 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 STAT6P42226 847 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 PMS2P54278 862 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 SLC12A1Q13621 1099 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 ARHGEF7Q14155 803 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 FAM26FQ5R3K3 315 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 SYPL2Q5VXT5 272 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 C22orf39Q6P5X5 142 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 OGFOD3Q6PK18 319 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 LVRNQ6Q4G3 990 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 ENPP7Q6UWV6 458 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 GKN2Q86XP6 184 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 C12orf56Q8IXR9 622 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 PDILTQ8N807 584 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 DENND6BQ8NEG7 585 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 SCG3Q8WXD2 468 aaKnown RBP11.22□□□□□ -0.61
GGA3-206ENST00000578773 SEMA4DQ92854 862 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 MRPL40Q9NQ50 206 aaKnown RBP11.22□□□□□ -0.61
GGA3-206ENST00000578773 CISHQ9NSE2 258 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 CCDC39Q9UFE4 941 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 VPS51Q9UID3 782 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 VPS28Q9UK41 221 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 HS3ST2Q9Y278 367 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 TLR6Q9Y2C9 796 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 COQ6Q9Y2Z9 468 aa11.22□□□□□ -0.61
GGA3-206ENST00000578773 FER1L5A0AVI2 2057 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 CDC14CA4D256 554 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 M0QYT0 321 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 AP1G1O43747 822 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 MMP20O60882 483 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 PNLIPP16233 465 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 PDCP20941 246 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 HNRNPH3P31942 346 aaKnown RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 L1CAMP32004 1257 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 STAT5AP42229 794 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 GCLMP48507 274 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 LIMK2P53671 638 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 AP3M2P53677 418 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 ABHD18Q0P651 414 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms