RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 SLC14A1Q13336 389 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 PDK1Q15118 436 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 OASLQ15646 514 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 CA9Q16790 459 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 DENND2CQ68D51 928 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 LRIG3Q6UXM1 1119 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 RFX8Q6ZV50 586 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 TRMT10CQ7L0Y3 403 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 BNIPLQ7Z465 357 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 TMC3Q7Z5M5 1100 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 SLCO6A1Q86UG4 719 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 ZC3H18Q86VM9 953 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 CCDC25Q86WR0 208 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 MARCH9Q86YJ5 346 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 ETFBKMTQ8IXQ9 262 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 FBXO25Q8TCJ0 367 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 BHMTQ93088 406 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 OTUB2Q96DC9 234 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 TKTL2Q9H0I9 626 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 ZDHHC18Q9NUE0 388 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 CACNA2D2Q9NY47 1150 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 DONSONQ9NYP3 566 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 CWC15Q9P013 229 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 SAE1Q9UBE0 346 aaPredicted RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 HCN2Q9UL51 889 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 ATP8A1Q9Y2Q0 1164 aa10.38□□□□□ -0.75
SS18-210ENST00000578700 GOLGA4Q13439 2230 aaKnown RBP10.38□□□□□ -0.75
SS18-210ENST00000578700 MEI4A8MW99 385 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 GOLGA8KD6RF30 607 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 DNALI1O14645 258 aaPredicted RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 KCNN4O15554 427 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 IRAK2O43187 625 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 HOXC11O43248 304 aaPredicted RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 PPFIA2O75334 1257 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 APOEP02649 317 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 GOT1P17174 413 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 IL4RP24394 825 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 ECHS1P30084 290 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 ITGA8P53708 1063 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PMS2P54278 862 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 GRIK2Q13002 908 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 MORF4L2Q15014 288 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 CCDC157Q569K6 752 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 OTUD1Q5VV17 481 aaPredicted RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 ZDHHC24Q6UX98 284 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PPP1R21Q6ZMI0 780 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 BHLHA9Q7RTU4 235 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 TAC4Q86UU9 113 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 FAM71DQ8N9W8 422 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 KNL1Q8NG31 2342 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 OVCA2Q8WZ82 227 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
SS18-210ENST00000578700 HAPLN3Q96S86 360 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 BBS2Q9BXC9 721 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 BRD8Q9H0E9 1235 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 OSBPL2Q9H1P3 480 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 NEUROG2Q9H2A3 272 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 IL21RQ9HBE5 538 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 IL37Q9NZH6 218 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 GMIPQ9P107 970 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 PAK5Q9P286 719 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 SUSD2Q9UGT4 822 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 SHOC2Q9UQ13 582 aa10.37□□□□□ -0.75
SS18-210ENST00000578700 URB1O60287 2271 aaKnown RBP10.36□□□□□ -0.75
SS18-210ENST00000578700 ASXL3Q9C0F0 2248 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 CABIN1Q9Y6J0 2220 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 PRRT4C9JH25 899 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 FGF10O15520 208 aaPredicted RBP10.36□□□□□ -0.75
SS18-210ENST00000578700 GJB3O75712 270 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 TBX18O95935 607 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 RARGP13631 454 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 TYRP14679 529 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 MX2P20592 715 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 AMPD1P23109 780 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 CD6P30203 668 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 HSD17B3P37058 310 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 TBX4P57082 545 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 PITX1P78337 314 aaPredicted RBP10.36□□□□□ -0.75
SS18-210ENST00000578700 COG7P83436 770 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 CYP4F3Q08477 520 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 SLC45A4Q5BKX6 768 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 C10orf120Q5SQS8 335 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 MSANTD2Q6P1R3 559 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 NPNTQ6UXI9 565 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 LRRC31Q6UY01 552 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 CENPUQ71F23 418 aa10.36□□□□□ -0.75
SS18-210ENST00000578700 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms