RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PSMA2P25787 234 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 HTR7P34969 479 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 HNF1BP35680 557 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 TPI1P60174 286 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 RHOAP61586 193 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 CYP4F3Q08477 520 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 ILKQ13418 452 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 PTAR1Q7Z6K3 402 aaPredicted RBP16.11■□□□□ 0.17
CRLF3-203ENST00000578692 SLC22A18ASQ8N1D0 253 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 NETO2Q8NC67 525 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 ASB12Q8WXK4 309 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 ARHGEF26Q96DR7 871 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 UCKL1Q9NWZ5 548 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 DONSONQ9NYP3 566 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 MFHAS1Q9Y4C4 1052 aa16.11■□□□□ 0.17
CRLF3-203ENST00000578692 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 FPGTO14772 594 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 PIAS2O75928 621 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 IGSF6O95976 241 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ACP1P24666 158 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 CLDN6P56747 220 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 CYTH1Q15438 398 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ZNF542PQ5EBM4 170 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ERMARDQ5T6L9 678 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 KYAT3Q6YP21 454 aaKnown RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ZNF571Q7Z3V5 609 aaPredicted RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 DNAAF5Q86Y56 855 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 OR4C6Q8NH72 309 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 KLF6Q99612 283 aaPredicted RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 GPATCH2LQ9NWQ4 482 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 DNAJC28Q9NX36 388 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 PCSK1NQ9UHG2 260 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 IPO11Q9UI26 975 aaKnown RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 AP4E1Q9UPM8 1137 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ITM2BQ9Y287 266 aa16.1■□□□□ 0.17
CRLF3-203ENST00000578692 TDRD6O60522 2096 aaKnown RBP16.1■□□□□ 0.17
CRLF3-203ENST00000578692 ARID1BQ8NFD5 2236 aaPredicted RBP16.09■□□□□ 0.17
CRLF3-203ENST00000578692 SPTY2D1-AS1A0A0U1RR47 76 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 NEMP2A6NFY4 417 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 AREL1O15033 823 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 ATMINO43313 823 aaPredicted RBP16.09■□□□□ 0.17
CRLF3-203ENST00000578692 RNF8O76064 485 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 SERPINC1P01008 464 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 PRKCIP41743 596 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 RABIFP47224 123 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 NDST2P52849 883 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 HNRNPKP61978 463 aaKnown RBP eCLIP16.09■□□□□ 0.17
CRLF3-203ENST00000578692 KLHL30Q0D2K2 578 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 NR1I3Q14994 352 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 IQCB1Q15051 598 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 ARFGAP1Q8N6T3 406 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
CRLF3-203ENST00000578692 EDEM3Q9BZQ6 932 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 DHX35Q9H5Z1 703 aaKnown RBP16.09■□□□□ 0.17
CRLF3-203ENST00000578692 LRRC19Q9H756 370 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 CAAP1Q9H8G2 361 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 GPR27Q9NS67 375 aa16.09■□□□□ 0.17
CRLF3-203ENST00000578692 IGF2RP11717 2491 aa16.08■□□□□ 0.17
CRLF3-203ENST00000578692 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 EEF2KO00418 725 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.162e-17■■■■□ 22.6
CRLF3-203ENST00000578692 FFAR2O15552 330 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 SPINT1O43278 529 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 GIMD1P0DJR0 217 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 ALPPL2P10696 532 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 TIMP2P16035 220 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 DAB2P98082 770 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.168e-6■□□□□ 10.7
CRLF3-203ENST00000578692 GOLGA4Q13439 2230 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 FZD2Q14332 565 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 CA9Q16790 459 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 HES3Q5TGS1 186 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 E4F1Q66K89 784 aaPredicted RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 DENND6BQ8NEG7 585 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 EIF3CQ99613 913 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 FUCA2Q9BTY2 467 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 SNRNP25Q9BV90 132 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 SLC39A8Q9C0K1 460 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 DKK3Q9UBP4 350 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 LHX3Q9UBR4 397 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 UBA2Q9UBT2 640 aaPredicted RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 CNOT8Q9UFF9 292 aaKnown RBP16.08■□□□□ 0.16
CRLF3-203ENST00000578692 RAXQ9Y2V3 346 aa16.08■□□□□ 0.16
CRLF3-203ENST00000578692 DMXL2Q8TDJ6 3036 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 ARHGAP42A6NI28 874 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 J3KR12 359 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 SCAMP1O15126 338 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 INSIG1O15503 277 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 DAPK3O43293 454 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 MMP20O60882 483 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 TM7SF2O76062 418 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 CSF2P04141 144 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 SKILP12757 684 aa16.07■□□□□ 0.16
CRLF3-203ENST00000578692 ITIH2P19823 946 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms