RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CES3Q6UWW8 571 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 RAPH1Q70E73 1250 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SDCCAG8Q86SQ7 713 aaPredicted RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
SKA2-204ENST00000578519 SLC25A41Q8N5S1 370 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 CCT6BQ92526 530 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 TADA1Q96BN2 335 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 C7orf26Q96N11 449 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 KLHL5Q96PQ7 755 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 PSKH2Q96QS6 385 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SEMA3CQ99985 751 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ADGRE3Q9BY15 652 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 UGT1A7Q9HAW7 530 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 UGT1A10Q9HAW8 530 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 UGT1A8Q9HAW9 530 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 SNX15Q9NRS6 342 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 TXLNGQ9NUQ3 528 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 CORO1CQ9ULV4 474 aaPredicted RBP11.25□□□□□ -0.61
SKA2-204ENST00000578519 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
SKA2-204ENST00000578519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 CFAP73A6NFT4 308 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 INSIG1O15503 277 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 VAPBO95292 243 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 GLUD1P00367 558 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 GABRR2P28476 465 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 SLC6A4P31645 630 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 MAGEA12P43365 314 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 CLCN5P51795 746 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 ARFIP2P53365 341 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 SLC7A9P82251 487 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 POU4F1Q01851 419 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 DSC2Q02487 901 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 NSUN2Q08J23 767 aaKnown RBP eCLIP11.24□□□□□ -0.61
SKA2-204ENST00000578519 USP10Q14694 798 aaKnown RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 PPM1LQ5SGD2 360 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 N4BP2L1Q5TBK1 243 aaPredicted RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 PDE12Q6L8Q7 609 aaKnown RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 FSTL4Q6MZW2 842 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 MRNIPQ6NTE8 343 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 RETSATQ6NUM9 610 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 RFWD3Q6PCD5 774 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 HTR3DQ70Z44 454 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 OTOAQ7RTW8 1153 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 WDR75Q8IWA0 830 aaKnown RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 CFAP52Q8N1V2 620 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 CPXM2Q8N436 756 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 KREMEN2Q8NCW0 462 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 BRSK1Q8TDC3 778 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 STYXQ8WUJ0 223 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 LRRC37BQ96QE4 947 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 NUDCD1Q96RS6 583 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 GPR22Q99680 433 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
SKA2-204ENST00000578519 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 PDFQ9HBH1 243 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 ASAH2Q9NR71 780 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 GKN1Q9NS71 199 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 HACD3Q9P035 362 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 SIRPGQ9P1W8 387 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 VPS9D1Q9Y2B5 631 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
SKA2-204ENST00000578519 A0A096LPK6 155 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 C2orf81A6NN90 581 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 TGM5O43548 720 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 TSPAN3O60637 253 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 PLIN3O60664 434 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 TBL1XO60907 577 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 LUC7L3O95232 432 aaKnown RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 OLFM2O95897 454 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 SERPINE1P05121 402 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 RB1P06400 928 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 CKMP06732 381 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 C8AP07357 584 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 CNPP09543 421 aaKnown RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 CPA3P15088 417 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 STMN1P16949 149 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 BGNP21810 368 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 BMPR1AP36894 532 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 ACVRL1P37023 503 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 SKIV2L2P42285 1042 aaKnown RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 ZBTB16Q05516 673 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 CDH18Q13634 790 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 PDE1CQ14123 709 aaPredicted RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 CHI3L2Q15782 390 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 CNGA3Q16281 694 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 KLC3Q6P597 504 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 LILRA6Q6PI73 481 aa11.23□□□□□ -0.61
SKA2-204ENST00000578519 ZC3HC1Q86WB0 502 aaKnown RBP11.23□□□□□ -0.61
SKA2-204ENST00000578519 CIR1Q86X95 450 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms