RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ADIPOR2Q86V24 386 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 KLHL7Q8IXQ5 586 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 AHI1Q8N157 1196 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 CCDC89Q8N998 374 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 FAM71DQ8N9W8 422 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 OR7D4Q8NG98 312 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 WFDC5Q8TCV5 224 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 WFIKKN2Q8TEU8 576 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 SEC14L1Q92503 715 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 BHMTQ93088 406 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 MSANTD3Q96H12 275 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 TEKT5Q96M29 485 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 FAM118BQ9BPY3 351 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 ERP44Q9BS26 406 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 LRRC1Q9BTT6 524 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 RSRP1Q9BUV0 290 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 C8orf33Q9H7E9 229 aaPredicted RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 PCDH9Q9HC56 1237 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 ATP13A1Q9HD20 1204 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 ABCB8Q9NUT2 735 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 GTSE1Q9NYZ3 720 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 THEGQ9P2T0 379 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 GGA2Q9UJY4 613 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 VPS28Q9UK41 221 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 INTS6Q9UL03 887 aaKnown RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 PCDHGC4Q9Y5F7 938 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 TARSL2A2RTX5 802 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 SGK1O00141 431 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 KHNYNO15037 678 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 TTI1O43156 1089 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 RAD51CO43502 376 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 OPHN1O60890 802 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 STK10O94804 968 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 CD160O95971 181 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 TUBBP07437 444 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 VAV1P15498 845 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 CD70P32970 193 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 OPRD1P41143 372 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 DGKGP49619 791 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ZP2Q05996 745 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 NSUN2Q08J23 767 aaKnown RBP eCLIP8.14□□□□□ -1.11
COPS3-215ENST00000578317 EIF4HQ15056 248 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 E2F5Q15329 346 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PITRM1Q5JRX3 1037 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 MARC1Q5VT66 337 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ARHGAP36Q6ZRI8 547 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 GSTA5Q7RTV2 222 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 RALGPS2Q86X27 583 aaPredicted RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 JAMLQ86YT9 394 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 APCDD1Q8J025 514 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 NAT16Q8N8M0 369 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 KDM1BQ8NB78 822 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 NETO2Q8NC67 525 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ST13P5Q8NFI4 369 aaPredicted RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 CSGALNACT1Q8TDX6 532 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 NSMCE1Q8WV22 266 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 EXOC4Q96A65 974 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 CHFRQ96EP1 664 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 SPATA13Q96N96 652 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PSKH2Q96QS6 385 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 SPON2Q9BUD6 331 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 DNAJC17Q9NVM6 304 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 HS3ST2Q9Y278 367 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 STARD13Q9Y3M8 1113 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 DENND4CQ5VZ89 1909 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 KCNK1O00180 336 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 BNIP3LO60238 219 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 OBSL1O75147 1896 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 JCHAINP01591 159 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ASLP04424 464 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ATP5BP06576 529 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 SRFP11831 508 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 POLR2EP19388 210 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 SP100P23497 879 aaPredicted RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 PTPN3P26045 913 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 IVDP26440 423 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ACTN2P35609 894 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 HSPA9P38646 679 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 GRIA2P42262 883 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 SLC6A11P48066 632 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ARF5P84085 180 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ECT2LQ008S8 904 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PTK6Q13882 451 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PARP6Q2NL67 630 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ANKRD20A2Q5SQ80 823 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ANKRD20A1Q5TYW2 823 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ANKRD20A3Q5VUR7 823 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 DUPD1Q68J44 220 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 GRAMD4Q6IC98 578 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 C8orf74Q6P047 294 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 C12orf40Q86WS4 652 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ZNF567Q8N184 647 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms