RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 AP2A1O95782 977 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 INHBAP08476 426 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 LINC00271P0C7V0 271 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 CSH1P0DML2 217 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 CSH2P0DML3 217 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ANPEPP15144 967 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 PPM1AP35813 382 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 DCTN2Q13561 401 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 THOC5Q13769 683 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 SPARCL1Q14515 664 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 PDK4Q16654 411 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 KCTD11Q693B1 232 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 MTDHQ86UE4 582 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 SLC26A11Q86WA9 606 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 LRRC6Q86X45 466 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 PIP4K2CQ8TBX8 421 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZNF419Q96HQ0 510 aaPredicted RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZNF512Q96ME7 567 aaPredicted RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 CDK5RAP1Q96SZ6 601 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 NAT9Q9BTE0 207 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 PPARGC1AQ9UBK2 798 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 TMEM98Q9Y2Y6 226 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZBBXA8MT70 800 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 JCHAINP01591 159 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ALOX15P16050 662 aaPredicted RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 RHOQP17081 205 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 NFKB1P19838 968 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 GRIA2P42262 883 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 SERPINB8P50452 374 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 KCNQ1P51787 676 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 CDC16Q13042 620 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ALFQ53S48 1182 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 RAP1GAP2Q684P5 730 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 NADSYN1Q6IA69 706 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 FBXL22Q6P050 247 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 SATL1Q86VE3 508 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 LRRC49Q8IUZ0 686 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 SNRNP27Q8WVK2 155 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 IGSF8Q969P0 613 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 NSL1Q96IY1 281 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 TRIM56Q9BRZ2 755 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZYG11BQ9C0D3 744 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 SLCO1B3Q9NPD5 702 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 TMEM248Q9NWD8 314 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZDHHC7Q9NXF8 308 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 ZNF180Q9UJW8 692 aa13.98□□□□□ -0.17
RNF43-202ENST00000577625 HBS1LQ9Y450 684 aaKnown RBP13.98□□□□□ -0.17
RNF43-202ENST00000577625 MYLKQ15746 1914 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 ARHGAP42A6NI28 874 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 TYROBPO43914 113 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 CACNG3O60359 315 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 CNTN5O94779 1100 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 GJB5O95377 273 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 CDK4P11802 303 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 CPA3P15088 417 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 ATP5C1P36542 298 aaKnown RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 HTRA4P83105 476 aaPredicted RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 OLIG2Q13516 323 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 ADRM1Q16186 407 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 TFAP2DQ7Z6R9 452 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 C4orf33Q8N1A6 199 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 UMODL1-AS1Q8N2C9 162 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 CNTD1Q8N815 330 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 DENND1AQ8TEH3 1009 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 ALKBH8Q96BT7 664 aaKnown RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 TRMT2BQ96GJ1 504 aaKnown RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 SIKE1Q9BRV8 207 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 MLPHQ9BV36 600 aaPredicted RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 PIH1D1Q9NWS0 290 aaKnown RBP13.97□□□□□ -0.17
RNF43-202ENST00000577625 NDE1Q9NXR1 346 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
RNF43-202ENST00000577625 LILRB3O75022 631 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 SPAG7O75391 227 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 FGF18O76093 207 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 ALDH1A2O94788 518 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 HAUS5O94927 633 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 PORP16435 677 aaPredicted RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 PGAM1P18669 254 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 KRT4P19013 534 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 FUT4P22083 530 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 MGAT1P26572 445 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 RAP1GDS1P52306 607 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 GSTM4Q03013 218 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 TIGD7Q6NT04 549 aaPredicted RBP13.96□□□□□ -0.17
RNF43-202ENST00000577625 KLHDC10Q6PID8 442 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 TCEAL8Q8IYN2 117 aa13.96□□□□□ -0.17
RNF43-202ENST00000577625 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms