RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 OXR1Q8N573 874 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 TSC1Q92574 1164 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 GDAP1L1Q96MZ0 367 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 LRRC19Q9H756 370 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 PDFQ9HBH1 243 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 GPR27Q9NS67 375 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 LHX3Q9UBR4 397 aa13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
CUEDC1-204ENST00000577497 ZSCAN5CA6NGD5 496 aaPredicted RBP13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 PIGNO95427 931 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 POP4O95707 220 aaKnown RBP13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 GIMD1P0DJR0 217 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 TCF4P15884 667 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 MIPP30301 263 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 PBX1P40424 430 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 YBEYP58557 167 aaPredicted RBP13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 RHOAP61586 193 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 FANCCQ00597 558 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 CAMK2BQ13554 666 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 PARP15Q460N3 678 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 GDPD4Q6W3E5 623 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 Q6ZSR6 202 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 PTAR1Q7Z6K3 402 aaPredicted RBP13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 PROSER1Q86XN7 944 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 NPWQ8N729 165 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 FEM1CQ96JP0 617 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 C1QTNF2Q9BXJ5 285 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 MYO1AQ9UBC5 1043 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 CHD6Q8TD26 2715 aa13.77□□□□□ -0.21
CUEDC1-204ENST00000577497 A6NNZ2 444 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 AREL1O15033 823 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 FFAR2O15552 330 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 LRCH4O75427 683 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 RFPL3O75679 317 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 IGSF6O95976 241 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 GZMAP12544 262 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 DGKAP23743 735 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 RGRP47804 291 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 FZD2Q14332 565 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 INO80DQ53TQ3 878 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 KYAT3Q6YP21 454 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 RFX8Q6ZV50 586 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 ARHGAP12Q8IWW6 846 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 TP53INP2Q8IXH6 220 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 KLHL11Q9NVR0 708 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 TRPM6Q9BX84 2022 aa13.76□□□□□ -0.21
CUEDC1-204ENST00000577497 NEMP1O14524 444 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 TSPAN6O43657 245 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PIAS2O75928 621 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 MYF5P13349 255 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 IL1R2P27930 398 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PAPOLAP51003 745 aaKnown RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PPP6R3Q5H9R7 873 aaPredicted RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 AFMIDQ63HM1 303 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 TTC7BQ86TV6 843 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 ZSWIM9Q86XI8 627 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 GALNT15Q8N3T1 639 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 FNIP1Q8TF40 1166 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 RAB7BQ96AH8 199 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 EDEM3Q9BZQ6 932 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 ISCUQ9H1K1 167 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 CCDC86Q9H6F5 360 aaKnown RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 KLF15Q9UIH9 416 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PNMA8BQ9ULN7 279 aaPredicted RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PCDHGA1Q9Y5H4 931 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 HS3ST3A1Q9Y663 406 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 PKD1L2Q7Z442 2459 aa13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 ARID1BQ8NFD5 2236 aaPredicted RBP13.75□□□□□ -0.21
CUEDC1-204ENST00000577497 DSPP15924 2871 aaKnown RBP13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 SPTY2D1-AS1A0A0U1RR47 76 aa13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 TRABD2BA6NFA1 517 aa13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 MMP20O60882 483 aa13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 NEBLO76041 1014 aa13.74□□□□□ -0.21
CUEDC1-204ENST00000577497 TIMP2P16035 220 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms