RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ATP9BO43861 1147 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 SOCS5O75159 536 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 USP1O94782 785 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 CPP00450 1065 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 CISD3P0C7P0 127 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 ALADP13716 330 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 CD70P32970 193 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 ELK3P41970 407 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 WNT3AP56704 352 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 NIPAL4Q0D2K0 466 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 CYTH1Q15438 398 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 KYNUQ16719 465 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 TMEM135Q86UB9 458 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 PALM2Q8IXS6 379 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 TTC16Q8NEE8 873 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 GSDMBQ8TAX9 411 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 USP33Q8TEY7 942 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 PLA2G2FQ9BZM2 168 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 ZC3H7BQ9UGR2 993 aaKnown RBP12.6□□□□□ -0.39
TSEN54-204ENST00000577197 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
TSEN54-204ENST00000577197 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 AGPSO00116 658 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SNAP91O60641 907 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 CDH16O75309 829 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 NDST3O95803 873 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 IGSF6O95976 241 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 ATP5BP06576 529 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 POLBP06746 335 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 PRKCHP24723 683 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 ATP5DP30049 168 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 GDI1P31150 447 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 CD86P42081 329 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 DGKGP49619 791 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 RHOAP61586 193 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 ECT2LQ008S8 904 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 CDK18Q07002 472 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 GRM2Q14416 872 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 FUT11Q495W5 492 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 PCID2Q5JVF3 399 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SPANXN3Q5MJ09 141 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 DENND5AQ6IQ26 1287 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 NUDT18Q6ZVK8 323 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 ADIPOR2Q86V24 386 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 APCDD1Q8J025 514 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SLC44A3Q8N4M1 653 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SCG3Q8WXD2 468 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 LRIG1Q96JA1 1093 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 C9orf72Q96LT7 481 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 TRIB3Q96RU7 358 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 CYTH2Q99418 400 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 RPP25Q9BUL9 199 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 CPEB1Q9BZB8 566 aaKnown RBP12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SOX13Q9UN79 622 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
TSEN54-204ENST00000577197 REV3LO60673 3130 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
TSEN54-204ENST00000577197 WASH3PC4AMC7 463 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 ARNTLO00327 626 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 SCAMP3O14828 347 aaKnown RBP12.58□□□□□ -0.4
TSEN54-204ENST00000577197 MUSKO15146 869 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 ACSL3O95573 720 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
TSEN54-204ENST00000577197 DLDP09622 509 aaKnown RBP12.58□□□□□ -0.4
TSEN54-204ENST00000577197 GLDCP23378 1020 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 ADRA1DP25100 572 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 PSMA3P25788 255 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 NNMTP40261 264 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 GPX6P59796 221 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 PDE1BQ01064 536 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 DSC2Q02487 901 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 RAD51Q06609 339 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 ITKQ08881 620 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 TDGQ13569 410 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 RUNX3Q13761 415 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 FASTKD3Q14CZ7 662 aaKnown RBP12.58□□□□□ -0.4
TSEN54-204ENST00000577197 GAB4Q2WGN9 574 aa12.58□□□□□ -0.4
TSEN54-204ENST00000577197 TJAP1Q5JTD0 557 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms