RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MRPL57Q9BQC6 102 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TRPV6Q9H1D0 765 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 ZBTB26Q9HCK0 441 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 C6orf203Q9P0P8 240 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PACSIN3Q9UKS6 424 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 DSEQ9UL01 958 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TBC1D30Q9Y2I9 924 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SHROOM3Q8TF72 1996 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TNFRSF10BO14763 440 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 KPNA6O60684 536 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PMPCBO75439 489 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 B3GAT3O94766 335 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CTSHP09668 335 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CCR1P32246 355 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PGFP49763 221 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PAPOLAP51003 745 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 POU4F1Q01851 419 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 GRM2Q14416 872 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 RFTN1Q14699 578 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 ARMC3Q5W041 872 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 BTBD8Q5XKL5 378 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 BNC2Q6ZN30 1099 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SCD5Q86SK9 330 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 C14orf80Q86SX3 495 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PQLC1Q8N2U9 271 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SPATA6LQ8N4H0 392 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TXNDC5Q8NBS9 432 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SPDYE1Q8NFV5 336 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 HEXDCQ8WVB3 486 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 GBP5Q96PP8 586 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 BTBD9Q96Q07 612 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 OMDQ99983 421 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 MTG1Q9BT17 334 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 AGO3Q9H9G7 860 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CLIC5Q9NZA1 410 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 COPG1Q9Y678 874 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PATJQ8NI35 1801 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SDHDO14521 159 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 GPR182O15218 404 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF623O75123 536 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 POMCP01189 267 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 XRCC1P18887 633 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ATP5F1P24539 256 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 RGS2P41220 211 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 CHRNA4P43681 627 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 THOP1P52888 689 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MED21Q13503 144 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PDCD2Q16342 344 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NXNQ6DKJ4 435 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 KDELC1Q6UW63 502 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 KIAA0408Q6ZU52 694 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 RTL3Q8N8U3 475 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 RSPH1Q8WYR4 309 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SYT17Q9BSW7 474 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ATP13A1Q9HD20 1204 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TBC1D13Q9NVG8 400 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 OSER1Q9NX31 292 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 FBXO5Q9UKT4 447 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 INPP5FQ9Y2H2 1132 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 HS3ST4Q9Y661 456 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MYLKQ15746 1914 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 EME2A4GXA9 379 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TCAF2A6NFQ2 919 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TRPC5OSA6NMA1 111 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TMEM233B4DJY2 109 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 E9PAM4 449 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MGEA5O60502 916 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PEX11BO96011 259 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PAX3P23760 479 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 DPP6P42658 865 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 KPNA2P52292 529 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SLC5A3P53794 718 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PFKPQ01813 784 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SATB1Q01826 763 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 CEACAM7Q14002 265 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MAPRE1Q15691 268 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 THEMIS2Q5TEJ8 643 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF470Q6ECI4 717 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 NEPROQ6NW34 567 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 ZFP1Q6P2D0 407 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 CNSTQ6PJW8 725 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SLC30A9Q6PML9 568 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 TRIM67Q6ZTA4 783 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 PIWIL4Q7Z3Z4 852 aaKnown RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 SDCCAG8Q86SQ7 713 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-204ENST00000574911 LRRC49Q8IUZ0 686 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 CCNYL1Q8N7R7 359 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 MARK4Q96L34 752 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 RANBP9Q96S59 729 aa9.03□□□□□ -0.96
NCBP3-204ENST00000574911 FSD1LQ9BXM9 530 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms