RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 VPS45Q9NRW7 570 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 COL6A3P12111 3177 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 PSMD3O43242 534 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 BANF1O75531 89 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 IGSF6O95976 241 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 AGTP01019 485 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 SRFP11831 508 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 NNMTP40261 264 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 ARL4CP56559 192 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 MSS51Q4VC12 460 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 EMBQ6PCB8 327 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 PPP1R21Q6ZMI0 780 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 Q6ZVU0 165 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 SRLQ86TD4 932 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 RYBPQ8N488 228 aaPredicted RBP24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 OR52K1Q8NGK4 314 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 TBL1YQ9BQ87 522 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 FAM53CQ9NYF3 392 aa24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 MUC22E2RYF6 1773 aaPredicted RBP24.33■■□□□ 1.49
ATPAF1-213ENST00000574428 ST8SIA6P61647 398 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 FNDC3BQ53EP0 1204 aaKnown RBP24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 HP1BP3Q5SSJ5 553 aaPredicted RBP24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 NCEH1Q6PIU2 408 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 RALGPS2Q86X27 583 aaPredicted RBP24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 PCDH20Q8N6Y1 951 aaKnown RBP24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 ZNF366Q8N895 744 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 OR2AP1Q8NGE2 309 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 FRS2Q8WU20 508 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 FOXP3Q9BZS1 431 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 MTG2Q9H4K7 406 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 ZDHHC4Q9NPG8 344 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 EVLQ9UI08 416 aaPredicted RBP24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 MYO10Q9HD67 2058 aa24.32■■□□□ 1.48
ATPAF1-213ENST00000574428 CES1P23141 567 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 GKP32189 559 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 ADRA1AP35348 466 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 SARNPP82979 210 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PFKPQ01813 784 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 DHX9Q08211 1270 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PDIK1LQ8N165 341 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 EZH1Q92800 747 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 C8orf33Q9H7E9 229 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 SLC2A4RGQ9NR83 387 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PRKAG3Q9UGI9 489 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 HCN2Q9UL51 889 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 GSRP00390 522 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 VASPP50552 380 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 SNRPD1P62314 119 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 ZNF234Q14588 700 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PON2Q15165 354 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 BBS9Q3SYG4 887 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 NAPEPLDQ6IQ20 393 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 LRRC8BQ6P9F7 803 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 NUDT18Q6ZVK8 323 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 TMC3Q7Z5M5 1100 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 UCMAQ8WVF2 138 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 CAVIN3Q969G5 261 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 FRMD8Q9BZ67 464 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 XAB2Q9HCS7 855 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 SAYSD1Q9NPB0 183 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 SLC8A2Q9UPR5 921 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PCDHGC4Q9Y5F7 938 aa24.31■■□□□ 1.48
ATPAF1-213ENST00000574428 PPFIA2O75334 1257 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 CHRNA4P43681 627 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 TNNT3P45378 269 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 AP1S1P61966 158 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 PDIA2Q13087 525 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 FASTKD3Q14CZ7 662 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 CARD16Q5EG05 197 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 EMC10Q5UCC4 262 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 EGFLAMQ63HQ2 1017 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 DPY19L3Q6ZPD9 716 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 CENPUQ71F23 418 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 SUGP1Q8IWZ8 645 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 DNAAF3Q8N9W5 541 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 CASS4Q9NQ75 786 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 OGFRQ9NZT2 677 aa24.3■■□□□ 1.48
ATPAF1-213ENST00000574428 MAGEA3P43357 314 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 CSNK1DP48730 415 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 CCNHP51946 323 aaPredicted RBP24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 SESN2P58004 480 aaPredicted RBP24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 SLC14A2Q15849 920 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 RALGPS1Q5JS13 557 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 LINC00523Q86TU6 105 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 AGGF1Q8N302 714 aaeCLIP24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 SLC25A41Q8N5S1 370 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 OR2A12Q8NGT7 310 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 IFT43Q96FT9 208 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 TSPYL1Q9H0U9 437 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 RAI2Q9Y5P3 530 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 K7EQS6 105 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 MAP2K7O14733 419 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 MLNP12872 115 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 HLA-EP13747 358 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 SEC13P55735 322 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 TRAF2Q12933 501 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 MYLK3Q32MK0 819 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 DENND5AQ6IQ26 1287 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 SERPINA13PQ6UXR4 307 aa24.29■■□□□ 1.48
ATPAF1-213ENST00000574428 RANBP10Q6VN20 620 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms