RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 INSIG1O15503 277 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 BNIP3LO60238 219 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 GAS8O95995 478 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 IL1BP01584 269 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 JCHAINP01591 159 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 RBL1P28749 1068 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 DEKP35659 375 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 TNNT3P45378 269 aaPredicted RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 PSMD8P48556 350 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 WASHC5Q12768 1159 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 MYLK3Q32MK0 819 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 ATXN7L2Q5T6C5 722 aaPredicted RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 ANO7Q6IWH7 933 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 ADAT2Q7Z6V5 191 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 WDR5BQ86VZ2 330 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 CREG2Q8IUH2 290 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 CCDC89Q8N998 374 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 GRIN3AQ8TCU5 1115 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 ATG4AQ8WYN0 398 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 EXOC2Q96KP1 924 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 MKRN2Q9H000 416 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 IRF2BPLQ9H1B7 796 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 SLC25A51Q9H1U9 297 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 GBA3Q9H227 469 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 USP36Q9P275 1121 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 DKK3Q9UBP4 350 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 PPM1HQ9ULR3 514 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 TPX2Q9ULW0 747 aaKnown RBP13.73□□□□□ -0.21
NDE1-209ENST00000574109 NCKAP1Q9Y2A7 1128 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 ACTL7AQ9Y615 435 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
NDE1-209ENST00000574109 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 KPNA3O00505 521 aaPredicted RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 AXIN1O15169 862 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 FANCGO15287 622 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 LEFTY1O75610 366 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ANXA9O76027 345 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 TDGF1P13385 188 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 OXTRP30559 389 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 CNR2P34972 360 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 SCNN1BP51168 640 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 ITKQ08881 620 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ANGPT1Q15389 498 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ZNF805Q5CZA5 627 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ARHGEF18Q6ZSZ5 1173 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 MMAAQ8IVH4 418 aaKnown RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 C1orf54Q8WWF1 131 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 MAGOHBQ96A72 148 aaKnown RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 RAB7BQ96AH8 199 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 ZNF419Q96HQ0 510 aaPredicted RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 MS4A14Q96JA4 679 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 CAPZA3Q96KX2 299 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 FAM129BQ96TA1 746 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 SEMA3CQ99985 751 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 TMEM121Q9BTD3 319 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 GLOD4Q9HC38 313 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 RSPH14Q9UHP6 348 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 CDC23Q9UJX2 597 aa13.72□□□□□ -0.21
NDE1-209ENST00000574109 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
NDE1-209ENST00000574109 ANTXRLA6NF34 631 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ESPNB1AK53 854 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 MUSKO15146 869 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ZNF185O15231 689 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 GCATO75600 419 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 UGT2B4P06133 528 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 NEK3P51956 506 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 POLR2LP62875 67 aaKnown RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 MPP3Q13368 585 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 PRPSAP1Q14558 356 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 USP39Q53GS9 565 aaKnown RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 ANKRD20A2Q5SQ80 823 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ANKRD20A1Q5TYW2 823 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ANKRD20A3Q5VUR7 823 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 NCEH1Q6PIU2 408 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 CCDC137Q6PK04 289 aaKnown RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
NDE1-209ENST00000574109 NDUFAF2Q8N183 169 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ZNF567Q8N184 647 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 PGBD5Q8N414 524 aa13.71□□□□□ -0.21
NDE1-209ENST00000574109 ATL2Q8NHH9 583 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms