RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 J3KR12 359 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 DAPK3O43293 454 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 LRCH4O75427 683 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 IGSF6O95976 241 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 NDST2P52849 883 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 PPP6R3Q5H9R7 873 aaPredicted RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 GCNT7Q6ZNI0 430 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 OR13H1Q8NG92 308 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 SYN2Q92777 582 aaPredicted RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 EXOC2Q96KP1 924 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 CNDP2Q96KP4 475 aaKnown RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 CALN1Q9BXU9 219 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 UBA2Q9UBT2 640 aaPredicted RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 ZMIZ1Q9ULJ6 1067 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 CAPN11Q9UMQ6 739 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 ITM2BQ9Y287 266 aa26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 BZW2Q9Y6E2 419 aaKnown RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 COL5A1P20908 1838 aaPredicted RBP26.42■■□□□ 1.82
NPLOC4-215ENST00000574095 EIF3CLB5ME19 914 aaKnown RBP26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 NEMP1O14524 444 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 INSIG1O15503 277 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 SDC3O75056 442 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 LDOC1O95751 146 aaPredicted RBP26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 SERPING1P05155 500 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 ZBED6P86452 979 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 RAD51Q06609 339 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 LRRC73Q5JTD7 316 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 KANSL1Q7Z3B3 1105 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 RAB7BQ96AH8 199 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 BMFQ96LC9 184 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 EIF3CQ99613 913 aaKnown RBP26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 CAAP1Q9H8G2 361 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 DONSONQ9NYP3 566 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 LHX3Q9UBR4 397 aa26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 TDRD6O60522 2096 aaKnown RBP26.41■■□□□ 1.82
NPLOC4-215ENST00000574095 WDFY3Q8IZQ1 3526 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 IGLON5A6NGN9 336 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 ENC1O14682 589 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 RAD51BO15315 384 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 TSPAN6O43657 245 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 ERCC2P18074 760 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 PAPOLAP51003 745 aaKnown RBP26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 DNAJC3Q13217 504 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 RFX8Q6ZV50 586 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 ABI3BPQ7Z7G0 1075 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 TTC7BQ86TV6 843 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 PDFQ9HBH1 243 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 HS3ST3A1Q9Y663 406 aa26.4■■□□□ 1.82
NPLOC4-215ENST00000574095 SPINT1O43278 529 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 ITIH2P19823 946 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 SGCGQ13326 291 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 CCNI2Q6ZMN8 369 aaPredicted RBP26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 Q6ZSR6 202 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 TMPRSS7Q7RTY8 843 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 VPS36Q86VN1 386 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 SLC22A18ASQ8N1D0 253 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 THAP2Q9H0W7 228 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 KLHL11Q9NVR0 708 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 LUC7L2Q9Y383 392 aaKnown RBP26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 MFHAS1Q9Y4C4 1052 aa26.39■■□□□ 1.82
NPLOC4-215ENST00000574095 TMEM8BA6NDV4 472 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 POM121BA6NF01 834 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 ARHGAP42A6NI28 874 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 PRAMEF11O60813 436 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 GYPCP04921 128 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 TCF4P15884 667 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 IL1R2P27930 398 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 NFKBIBQ15653 356 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 DHRS13Q6UX07 377 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 PTAR1Q7Z6K3 402 aaPredicted RBP26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 MARCH9Q86YJ5 346 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 PSTKQ8IV42 348 aaKnown RBP26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 ARHGAP12Q8IWW6 846 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 ZCCHC14Q8WYQ9 949 aaKnown RBP26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 NCAPGQ9BPX3 1015 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 C1QTNF2Q9BXJ5 285 aa26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 CWC15Q9P013 229 aaKnown RBP26.38■■□□□ 1.81
NPLOC4-215ENST00000574095 ARID1BQ8NFD5 2236 aaPredicted RBP26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 A0A087X0T9 212 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 A6NNZ2 444 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 AREL1O15033 823 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 PIGNO95427 931 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 FAM228BP0C875 321 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 TIMP2P16035 220 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 PCK1P35558 622 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 ACAP1Q15027 740 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 SMTNL2Q2TAL5 461 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 SLC25A45Q8N413 288 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 ARHGEF26Q96DR7 871 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 IQCDQ96DY2 449 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 BTBD6Q96KE9 485 aa26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 KLF6Q99612 283 aaPredicted RBP26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 CPEB1Q9BZB8 566 aaKnown RBP26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 XPO4Q9C0E2 1151 aaKnown RBP26.37■■□□□ 1.81
NPLOC4-215ENST00000574095 DFFAO00273 331 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 CASP14P31944 242 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 AFMIDQ63HM1 303 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 ARHGAP36Q6ZRI8 547 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 ZSCAN30Q86W11 494 aa26.36■■□□□ 1.81
NPLOC4-215ENST00000574095 NPWQ8N729 165 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms