RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 TRIM62Q9BVG3 475 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 CALN1Q9BXU9 219 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 SLC17A9Q9BYT1 436 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 ST7Q9NRC1 585 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 ASNSD1Q9NWL6 643 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 DNAJC28Q9NX36 388 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 IL17BQ9UHF5 180 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 ZDHHC9Q9Y397 364 aa8.28□□□□□ -1.08
NPLOC4-211ENST00000573212 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 PMS2P1A4D2B8 440 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 TERTO14746 1132 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 CASC3O15234 703 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 SPINT1O43278 529 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 SLC28A2O43868 658 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 SNAP91O60641 907 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 TCEA3O75764 348 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 CNTN5O94779 1100 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 PCDH8O95206 1070 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 PRNPP04156 253 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 ARSDP51689 593 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 PDX1P52945 283 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 CDK17Q00537 523 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 LRRC63Q05C16 580 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 EIF2B5Q13144 721 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 MTA1Q13330 715 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 CDKN3Q16667 212 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 C3orf38Q5JPI3 329 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 TPRG1LQ5T0D9 272 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 ZNF658Q5TYW1 1059 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 CCDC81Q6ZN84 652 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 EFL1Q7Z2Z2 1120 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 ZNF683Q8IZ20 524 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 ZNF548Q8NEK5 533 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 WDR36Q8NI36 951 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 ASB12Q8WXK4 309 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 VOPP1Q96AW1 172 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 FEM1CQ96JP0 617 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 RPRD1AQ96P16 312 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 TSG101Q99816 390 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 BOCQ9BWV1 1114 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 NCKIPSDQ9NZQ3 722 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 VPS28Q9UK41 221 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 VANGL2Q9ULK5 521 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 FADS3Q9Y5Q0 445 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 HS3ST4Q9Y661 456 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
NPLOC4-211ENST00000573212 NAV2Q8IVL1 2488 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 HECTD1Q9ULT8 2610 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 A0A0D9SEW6 157 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 KPNA3O00505 521 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 NTN3O00634 580 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 AQP9O43315 295 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 AP1G1O43747 822 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 BNIP3LO60238 219 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 PAGE1O75459 146 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 GCATO75600 419 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 TNFSF15O95150 251 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 RRM1P23921 792 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 RABIFP47224 123 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 PFN3P60673 137 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 RPS21P63220 83 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 KRT83P78385 493 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 KRT85P78386 507 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 PNOCQ13519 176 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ALFQ53S48 1182 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 EFHC1Q5JVL4 640 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 OR6B2Q6IFH4 312 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 KIAA1161Q6NSJ0 714 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 RBM44Q6ZP01 1051 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 DPY19L3Q6ZPD9 716 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ARL14Q8N4G2 192 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ATP11CQ8NB49 1132 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 WDR48Q8TAF3 677 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 C1orf74Q96LT6 269 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 GSDMAQ96QA5 445 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 CCNL2Q96S94 520 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 SEMA3CQ99985 751 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ANLNQ9NQW6 1124 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 STARD5Q9NSY2 213 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 RMND1Q9NWS8 449 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 DDIT4Q9NX09 232 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 IL36AQ9UHA7 158 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 VPS51Q9UID3 782 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 ACSL6Q9UKU0 697 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 PNMA8BQ9ULN7 279 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 PCDHGA7Q9Y5G6 932 aa8.26□□□□□ -1.09
NPLOC4-211ENST00000573212 CCDC187A0A096LP49 1063 aa8.25□□□□□ -1.09
NPLOC4-211ENST00000573212 TLDC2A0PJX2 215 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms