RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 KIAA0930Q6ICG6 404 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 JADE1Q6IE81 842 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 MOXD1Q6UVY6 613 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 KIF6Q6ZMV9 814 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 TOM1L2Q6ZVM7 507 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 DYMQ7RTS9 669 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SPATA21Q7Z572 469 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CAMKMTQ7Z624 323 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 TADA2BQ86TJ2 420 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SGMS1Q86VZ5 419 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 AMZ2Q86W34 360 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CFAP206Q8IYR0 622 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 UNC5BQ8IZJ1 945 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PQLC1Q8N2U9 271 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 NAT16Q8N8M0 369 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 LINC00116Q8NCU8 138 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 FBXO18Q8NFZ0 1043 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PHOSPHO1Q8TCT1 267 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC26A7Q8TE54 656 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ART5Q96L15 291 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ZFP42Q96MM3 310 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PAFAH2Q99487 392 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 KCNF1Q9H3M0 494 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 RMND5AQ9H871 391 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 POLR1BQ9H9Y6 1135 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 BCO1Q9HAY6 547 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 FBRSL1Q9HCM7 1045 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 FSCN3Q9NQT6 498 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 LANCL2Q9NS86 450 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 AP5S1Q9NUS5 200 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ERAP1Q9NZ08 941 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 GDE1Q9NZC3 331 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ACSL6Q9UKU0 697 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CNOT11Q9UKZ1 510 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 HPSEQ9Y251 543 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 MRPS7Q9Y2R9 242 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SERTM2A0A1B0GWG4 89 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SSU72P8A0A1W2PR75 194 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SHISA3A0PJX4 238 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC38A8A6NNN8 435 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ADARB2-AS1A8MUL3 147 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 EIF3CLB5ME19 914 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 F8WDY8 70 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TM4SF5O14894 197 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PAPSS1O43252 624 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 GPR32O75388 356 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PRDM1O75626 825 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 DNAJB5O75953 348 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CDKL5O76039 1030 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SLCO2B1O94956 709 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SCAF4O95104 1147 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CER1O95813 267 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 IGHA1P01876 353 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 KRT14P02533 472 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CSF2P04141 144 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 STAG3L3P0CL85 134 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CYP2C9P11712 490 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 AREGP15514 252 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TRIM21P19474 475 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CHRM3P20309 590 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 GPTP24298 496 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PTBP1P26599 531 aaKnown RBP eCLIP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ARHGAP25P42331 645 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ASPAP45381 313 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PTDSS1P48651 473 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC8A3P57103 927 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ATP2C1P98194 919 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CSTF3Q12996 717 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TSTA3Q13630 321 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 KCNAB1Q14722 419 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 KARSQ15046 597 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PGM5Q15124 567 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 GSTA3Q16772 222 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 IGSF11Q5DX21 431 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 DAB2IPQ5VWQ8 1189 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 STEAP3Q658P3 488 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 PDPK2PQ6A1A2 396 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ABLIM2Q6H8Q1 611 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 GRAMD4Q6IC98 578 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 AAGABQ6PD74 315 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TRIM72Q6ZMU5 477 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 LDHDQ86WU2 507 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TIGD4Q8IY51 512 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 MMP21Q8N119 569 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 BATF2Q8N1L9 274 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ARFGAP2Q8N6H7 521 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 TSPAN14Q8NG11 270 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC2A12Q8TD20 617 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ACTRT2Q8TDY3 377 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ABHD5Q8WTS1 349 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 CHURC1Q8WUH1 139 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SNX33Q8WV41 574 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 NUDT8Q8WV74 236 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 RAPGEF4Q8WZA2 1011 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC9A6Q92581 669 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 ARSGQ96EG1 525 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 HES6Q96HZ4 224 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 C7orf34Q96L11 122 aa5.11□□□□□ -1.59
TOPBP1-210ENST00000572787 IFT74Q96LB3 600 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms