RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 GPM6BQ13491 265 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 BMPR2Q13873 1038 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 POU6F1Q14863 301 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PCSK7Q16549 785 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PDK4Q16654 411 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 QPCTQ16769 361 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MPPE1Q53F39 396 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SIRPB2Q5JXA9 342 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 STXBP5Q5T5C0 1151 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 GPR158Q5T848 1215 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MROH9Q5TGP6 573 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 RNF43Q68DV7 783 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 KIAA0930Q6ICG6 404 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 FOXR1Q6PIV2 292 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 LVRNQ6Q4G3 990 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 RGS9BPQ6ZS82 235 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SPRED2Q7Z698 418 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PIGWQ7Z7B1 504 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 STRA8Q7Z7C7 330 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 CPLX4Q7Z7G2 160 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TAX1BP1Q86VP1 789 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC25A41Q8N5S1 370 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TCP10LQ8TDR4 215 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MICAL1Q8TDZ2 1067 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ALG14Q96F25 216 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PSKH2Q96QS6 385 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 NUDCD1Q96RS6 583 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 KLF6Q99612 283 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 RBBP8Q99708 897 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 NSRP1Q9H0G5 558 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MUC3BQ9H195 1237 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TASP1Q9H6P5 420 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MLXIPLQ9NP71 852 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TREX1Q9NSU2 369 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 C20orf96Q9NUD7 363 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 HCFC1R1Q9NWW0 138 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TXNDC16Q9P2K2 825 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC17A6Q9P2U8 582 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 DNMT3BQ9UBC3 853 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 GGA2Q9UJY4 613 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PSAT1Q9Y617 370 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PLXNA2O75051 1894 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 GRXCR1A8MXD5 290 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CBX4O00257 560 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 EBAG9O00559 213 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SCAMP3O14828 347 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 INSIG1O15503 277 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MAP3K13O43283 966 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TIMM44O43615 452 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SNAP91O60641 907 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 XYLBO75191 536 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 RFPL2O75678 378 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CSPG5O95196 566 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 NDST3O95803 873 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CD160O95971 181 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 RHOP08100 348 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ITGA2BP08514 1039 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ATXN1LP0C7T5 689 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TCF3P15923 654 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 EPCAMP16422 314 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PAMP19021 973 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MZF1P28698 734 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CRHR1P34998 444 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 HADHAP40939 763 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CSKP41240 450 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ETV4P43268 484 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MAGEA12P43365 314 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 RGRP47804 291 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARCN1P48444 511 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PLK1P53350 603 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 LIMK2P53671 638 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 HNRNPH2P55795 449 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CDK18Q07002 472 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 NSUN2Q08J23 767 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 LAMB3Q13751 1172 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SEPT6Q14141 434 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TEAD2Q15562 447 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 INO80DQ53TQ3 878 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 FSCBQ5H9T9 825 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 RALGPS1Q5JS13 557 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PRSS36Q5K4E3 855 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 C9orf50Q5SZB4 431 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MPP7Q5T2T1 576 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TSTD2Q5T7W7 516 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ESRP1Q6NXG1 681 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 NLRP9Q7RTR0 991 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 KDELC2Q7Z4H8 507 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SPATS2Q86XZ4 545 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CNTN4Q8IWV2 1026 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 BBS7Q8IWZ6 715 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CMTM8Q8IZV2 173 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 NDUFAF2Q8N183 169 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 DCAF4L2Q8NA75 395 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TDRD5Q8NAT2 981 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms