RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 TRMUO75648 421 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 CD4P01730 458 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 CAPNS1P04632 268 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 GJA9P57773 515 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 LILRA4P59901 499 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 AGKQ53H12 422 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 ARHGAP36Q6ZRI8 547 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 HEXDCQ8WVB3 486 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 ADAMTS10Q9H324 1103 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 OR12D3Q9UGF7 316 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 FBXW11Q9UKB1 542 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PRORSD1PA6NEY8 169 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 COG7P83436 770 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 GALNT2Q10471 571 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 IKBKEQ14164 716 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PRPSAP1Q14558 356 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 TMEM79Q9BSE2 394 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 MRPL46Q9H2W6 279 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 RHBDL2Q9NX52 303 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 TRPC5OSA6NMA1 111 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 AURKAO14965 403 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PFDN1O60925 122 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 LRIG2O94898 1065 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 CCNA1P78396 465 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 CSHL1Q14406 222 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 KIAA0319Q5VV43 1072 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PKN3Q6P5Z2 889 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 HERC6Q8IVU3 1022 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 SPPL2BQ8TCT7 592 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 PPWD1Q96BP3 646 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 MAELQ96JY0 434 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 ATXN3LQ9H3M9 355 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 NOL11Q9H8H0 719 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 NSMCE4AQ9NXX6 385 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 LMCD1Q9NZU5 365 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 GMPR2Q9P2T1 348 aaKnown RBP17.65■□□□□ 0.42
SCARF1-205ENST00000571272 COL1A2P08123 1366 aa17.65■□□□□ 0.42
SCARF1-205ENST00000571272 DFFAO00273 331 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 FBP2O00757 339 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 MTSS1O43312 755 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 KCNA5P22460 613 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SULT2A1Q06520 285 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 MYBPC3Q14896 1274 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 PITRM1Q5JRX3 1037 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 NUP93Q8N1F7 819 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SLCO4A1Q96BD0 722 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SLC39A3Q9BRY0 314 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 DNAI2Q9GZS0 605 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 TKTL2Q9H0I9 626 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 CACNA2D2Q9NY47 1150 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 CKMT2P17540 419 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 RPL10P27635 214 aaKnown RBP17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SLC1A2P43004 574 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 FASTKQ14296 549 aaKnown RBP17.64■□□□□ 0.41
SCARF1-205ENST00000571272 REP15Q6BDI9 236 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 KRT80Q6KB66 452 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 OR9I1Q8NGQ6 314 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 NTAN1Q96AB6 310 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SLC9A7Q96T83 725 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 COLEC11Q9BWP8 271 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 WDCPQ9H6R7 721 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 SBF1O95248 1867 aa17.64■□□□□ 0.41
SCARF1-205ENST00000571272 PLOD2O00469 737 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 HSPA1AP0DMV8 641 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 HSPA1BP0DMV9 641 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 COL6A2P12110 1019 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ARNTP27540 789 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 DAOAP59103 153 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 RHDQ02161 417 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 SV2CQ496J9 727 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 PCID2Q5JVF3 399 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 RWDD4Q6NW29 188 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 PELI3Q8N2H9 469 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 FAM110BQ8TC76 370 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF597Q96LX8 424 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 UNC93B1Q9H1C4 597 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 TMEM30AQ9NV96 361 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 NRCAMQ92823 1304 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ATP6AP2A0A1C7CYW4 349 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 HEATR9A2RTY3 570 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 PSMD12O00232 456 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 UBDO15205 165 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 GPR32O75388 356 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ATP6AP2O75787 350 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 TSPAN8P19075 237 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 CDH15P55291 814 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 STX5Q13190 355 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 LRP8Q14114 963 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 UGP2Q16851 508 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ARL13BQ3SXY8 428 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF470Q6ECI4 717 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 KLC3Q6P597 504 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms