RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 WNT3AP56704 352 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 GRSF1Q12849 480 aaKnown RBP eCLIP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 OLIG2Q13516 323 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 ZNF234Q14588 700 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 BRD3Q15059 726 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MAP9Q49MG5 647 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SLC44A4Q53GD3 710 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 IER5LQ5T953 404 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 EGFLAMQ63HQ2 1017 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 KCTD11Q693B1 232 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 CCDC25Q86WR0 208 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 KDM1BQ8NB78 822 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MCUQ8NE86 351 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MYO19Q96H55 970 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 TBL1YQ9BQ87 522 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 THAP10Q9P2Z0 257 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 EVLQ9UI08 416 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SORCS3Q9UPU3 1222 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MIA3Q5JRA6 1907 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 USP12O75317 370 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SUN1O94901 812 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 EGFP01133 1207 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 HLA-EP13747 358 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 CSNK1DP48730 415 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 CCNHP51946 323 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SEC13P55735 322 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 ARL4CP56559 192 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 E2F5Q15329 346 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MLF2Q15773 248 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 HIF1AQ16665 826 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 CARD16Q5EG05 197 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 TMEM196Q5HYL7 178 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 NAPEPLDQ6IQ20 393 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 FSTL4Q6MZW2 842 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 NCEH1Q6PIU2 408 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SERPINA13PQ6UXR4 307 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 ZNF366Q8N895 744 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 FRS2Q8WU20 508 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 IFT43Q96FT9 208 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 MRGPRX2Q96LB1 330 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 PWWP2AQ96N64 755 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 SERPINB12Q96P63 405 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 APOL2Q9BQE5 337 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 FRMD8Q9BZ67 464 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 FOXP3Q9BZS1 431 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 XAB2Q9HCS7 855 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 ARGLU1Q9NWB6 273 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 HECAQ9UBI9 543 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 FAM153BP0C7A2 387 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 DRD1P21728 446 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 CA4P22748 312 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 GRIA1P42261 906 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 IHHQ14623 411 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 FAM153CQ494X1 144 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 DNAJC21Q5F1R6 531 aaKnown RBP15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 DPY19L3Q6ZPD9 716 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 ZNF534Q76KX8 674 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 KDELC2Q7Z4H8 507 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 LINC00523Q86TU6 105 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 PDIK1LQ8N165 341 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 ZNF513Q8N8E2 541 aaPredicted RBP15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 OR52K1Q8NGK4 314 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 AENQ8WTP8 325 aaKnown RBP15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 FAM3CQ92520 227 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 MTG2Q9H4K7 406 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 ZDHHC6Q9H6R6 413 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 ATP13A3Q9H7F0 1226 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 ZDHHC4Q9NPG8 344 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 CACNA2D2Q9NY47 1150 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 CA14Q9ULX7 337 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 RAI2Q9Y5P3 530 aa15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 MUC22E2RYF6 1773 aaPredicted RBP15.59■□□□□ 0.09
HERPUD1-219ENST00000570273 EDDM13A0A1B0GTR0 161 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 CCDC151A5D8V7 595 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 K7EQS6 105 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 PPFIA2O75334 1257 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 PIGNO95427 931 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 AGTP01019 485 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 PRKCHP24723 683 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 GKP32189 559 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 ADRA1AP35348 466 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 TIE1P35590 1138 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 IL12RB1P42701 662 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 RAD51Q06609 339 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 CDK18Q07002 472 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 BCL2L1Q07817 233 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 TRAF2Q12933 501 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 MTM1Q13496 603 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 MYLK3Q32MK0 819 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 HNRNPA1L2Q32P51 320 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 BBS9Q3SYG4 887 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 EMC10Q5UCC4 262 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 LRRC8BQ6P9F7 803 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 EMBQ6PCB8 327 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms