RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 GPATCH2LQ9NWQ4 482 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 LHX3Q9UBR4 397 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 CFAP46Q8IYW2 2715 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 SHROOM3Q8TF72 1996 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 A0A087WV48 116 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 CXorf51AA0A1B0GTR3 108 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 A6NNZ2 444 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 KRIT1O00522 736 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 GSRP00390 522 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 CALB1P05937 261 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 JUPP14923 745 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 RPS21P63220 83 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 EIF2B5Q13144 721 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 POLD3Q15054 466 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 CA9Q16790 459 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 MYLK3Q32MK0 819 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 ARL13BQ3SXY8 428 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 SOWAHCQ53LP3 525 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 ZNF805Q5CZA5 627 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 KIAA1161Q6NSJ0 714 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 CYP4V2Q6ZWL3 525 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 SLFN11Q7Z7L1 901 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 MCOLN2Q8IZK6 566 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 RYBPQ8N488 228 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 DCBLD1Q8N8Z6 715 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 ZNF548Q8NEK5 533 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 KLHL32Q96NJ5 620 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 PEBP4Q96S96 227 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 BPIFA3Q9BQP9 254 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 TCEAL2Q9H3H9 227 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 PDFQ9HBH1 243 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 SEPT11Q9NVA2 429 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 PCDHB1Q9Y5F3 818 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
GTF3C1-211ENST00000569653 SPTY2D1-AS1A0A0U1RR47 76 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 RASA4BC9J798 803 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 K7ESM1 405 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 RASA4O43374 803 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 NME1P15531 152 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 ITPKBP27987 946 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 EPHB2P29323 1055 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 IGFALSP35858 605 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 ETFBP38117 255 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 PFN3P60673 137 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 ILKQ13418 452 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 COL9A2Q14055 689 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 CYTH1Q15438 398 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 DNAJC24Q6P3W2 148 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 TMC6Q7Z403 805 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 RBFAQ8N0V3 343 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 FEM1CQ96JP0 617 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 EXOC2Q96KP1 924 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 APOLD1Q96LR9 279 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 NSMCE3Q96MG7 304 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 DNAJC28Q9NX36 388 aa14.04□□□□□ -0.16
GTF3C1-211ENST00000569653 SMTNL1A8MU46 457 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 WASH4PA8MWX3 477 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 TSPAN6O43657 245 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 BUB1O43683 1085 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CREB3O43889 395 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 PIGNO95427 931 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CSF2P04141 144 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CKMT1AP12532 417 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 TIMP2P16035 220 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 RGRP47804 291 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 SEMG2Q02383 582 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 SERINC3Q13530 473 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 RTP5Q14D33 572 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CDCP2Q5VXM1 449 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 KCTD16Q68DU8 428 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 ACAD10Q6JQN1 1059 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 SCYL2Q6P3W7 929 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 UMODL1-AS1Q8N2C9 162 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CENPTQ96BT3 561 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 IFT43Q96FT9 208 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 LENG8Q96PV6 779 aaPredicted RBP14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 CNPY3Q9BT09 278 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 FUCA2Q9BTY2 467 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 TTYH3Q9C0H2 523 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 RETREG1Q9H6L5 497 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 LRRC19Q9H756 370 aa14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 MBNL1Q9NR56 388 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-211ENST00000569653 A0A1W2PNU3 283 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 J3KR12 359 aa14.02□□□□□ -0.17
GTF3C1-211ENST00000569653 SCAMP1O15126 338 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms