RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ZBED6P86452 979 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 CA9Q16790 459 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 HS1BP3Q53T59 392 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 CCDC157Q569K6 752 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 PSTKQ8IV42 348 aaKnown RBP14.65□□□□□ -0.06
CMTM3-215ENST00000568477 ARFGAP1Q8N6T3 406 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 KDF1Q8NAX2 398 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-215ENST00000568477 FAM174AQ8TBP5 190 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 ARHGEF26Q96DR7 871 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 KLHL32Q96NJ5 620 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 PEBP4Q96S96 227 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 KCTD15Q96SI1 283 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-215ENST00000568477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.65□□□□□ -0.06
CMTM3-215ENST00000568477 ISCUQ9H1K1 167 aa14.65□□□□□ -0.06
CMTM3-215ENST00000568477 UBA2Q9UBT2 640 aaPredicted RBP14.65□□□□□ -0.06
CMTM3-215ENST00000568477 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 A6NNZ2 444 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 LRCH4O75427 683 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 LDOC1O95751 146 aaPredicted RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 SERPING1P05155 500 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 ZNF135P52742 658 aaPredicted RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CLDN2P57739 230 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 BNIP3Q12983 259 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 SGCGQ13326 291 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 PPP6R3Q5H9R7 873 aaPredicted RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 SARM1Q6SZW1 724 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 GDPD4Q6W3E5 623 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 GCNT7Q6ZNI0 430 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 ABI3BPQ7Z7G0 1075 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 EID2Q8N6I1 236 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 NETO2Q8NC67 525 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 OR13H1Q8NG92 308 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 ZCCHC14Q8WYQ9 949 aaKnown RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CELF6Q96J87 481 aaKnown RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CNDP2Q96KP4 475 aaKnown RBP14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CALN1Q9BXU9 219 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 SLC17A9Q9BYT1 436 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 LRRC19Q9H756 370 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 KLHL11Q9NVR0 708 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 IFNKQ9P0W0 207 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 CAPN11Q9UMQ6 739 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 KNTC1P50748 2209 aa14.64□□□□□ -0.07
CMTM3-215ENST00000568477 ENC1O14682 589 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 PRAMEF11O60813 436 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 KRT37O76014 449 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 PAK4O96013 591 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 TPM3P06753 285 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 PCK1P35558 622 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 FGL2Q14314 439 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 ACAP1Q15027 740 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 KYAT3Q6YP21 454 aaKnown RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 CCNI2Q6ZMN8 369 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 CYP4V2Q6ZWL3 525 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 TMPRSS7Q7RTY8 843 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 KANSL1Q7Z3B3 1105 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 PTAR1Q7Z6K3 402 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 VOPP1Q96AW1 172 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 C1QTNF2Q9BXJ5 285 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 LHX3Q9UBR4 397 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 ZMIZ1Q9ULJ6 1067 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 LUC7L2Q9Y383 392 aaKnown RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 MFHAS1Q9Y4C4 1052 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 HS3ST3A1Q9Y663 406 aa14.63□□□□□ -0.07
CMTM3-215ENST00000568477 ARID1BQ8NFD5 2236 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 COL5A1P20908 1838 aaPredicted RBP14.63□□□□□ -0.07
CMTM3-215ENST00000568477 IGLON5A6NGN9 336 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 H3BRJ5 948 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 J3KR12 359 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 SPINT1O43278 529 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 SDC3O75056 442 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 ERCC2P18074 760 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 HCAR3P49019 387 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 PAPOLAP51003 745 aaKnown RBP14.62□□□□□ -0.07
CMTM3-215ENST00000568477 CYTH1Q15438 398 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 Q6ZSR6 202 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 TTC7BQ86TV6 843 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 DCP2Q8IU60 420 aaKnown RBP14.62□□□□□ -0.07
CMTM3-215ENST00000568477 GALNT15Q8N3T1 639 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 DENND6BQ8NEG7 585 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 ASB12Q8WXK4 309 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 EXOC2Q96KP1 924 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 CPEB1Q9BZB8 566 aaKnown RBP14.62□□□□□ -0.07
CMTM3-215ENST00000568477 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 SP110Q9HB58 689 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 DKK3Q9UBP4 350 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 PCDHGA1Q9Y5H4 931 aa14.62□□□□□ -0.07
CMTM3-215ENST00000568477 ANKRD11Q6UB99 2663 aaPredicted RBP14.62□□□□□ -0.07
CMTM3-215ENST00000568477 ACACAQ13085 2346 aa14.61□□□□□ -0.07
CMTM3-215ENST00000568477 FPGTO14772 594 aa14.61□□□□□ -0.07
CMTM3-215ENST00000568477 AREL1O15033 823 aa14.61□□□□□ -0.07
CMTM3-215ENST00000568477 RAD51BO15315 384 aa14.61□□□□□ -0.07
CMTM3-215ENST00000568477 INSIG1O15503 277 aa14.61□□□□□ -0.07
CMTM3-215ENST00000568477 GYPCP04921 128 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms