RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CAMK2AQ9UQM7 478 aa5.06□□□□□ -1.6
SHCBP1-206ENST00000567698 PCDHGB5Q9Y5G0 923 aa5.06□□□□□ -1.6
SHCBP1-206ENST00000567698 ZNF521Q96K83 1311 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 HSPB2A8KAH6 182 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 TSPAN4O14817 238 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 KLK8O60259 260 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 WDHD1O75717 1129 aaPredicted RBP5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 ITGAXP20702 1163 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 THPOP40225 353 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PAFAH1B1P43034 410 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 GPR12P47775 334 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PTGR1Q14914 329 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 HSPB2Q16082 182 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 WASHC2DQ5SRD0 308 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 ATG9BQ674R7 924 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 HEPHL1Q6MZM0 1159 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 Q6ZSV7 163 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 CTU1Q7Z7A3 348 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PELI3Q8N2H9 469 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 C11orf65Q8NCR3 313 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 TMEM163Q8TC26 289 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PERPQ96FX8 193 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 YME1L1Q96TA2 773 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 NPFFR1Q9GZQ6 430 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PLEKHA4Q9H4M7 779 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 PCDHB16Q9NRJ7 776 aa5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 SPATS2LQ9NUQ6 558 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-206ENST00000567698 A0A096LPK6 155 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 TEX13CA0A0J9YWL9 993 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 A0A1W2PPH5 198 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 BECN2A8MW95 431 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 SOX30O94993 753 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 RTN3O95197 1032 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 ENO3P13929 434 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 PTPN2P17706 415 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 TBXAS1P24557 533 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 FMO4P31512 558 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 ABCD1P33897 745 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 RFC1P35251 1148 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 KRT9P35527 623 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 HARS2P49590 506 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 CCR9P51686 369 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 P2RX3P56373 397 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 FAM27E3Q08E93 113 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 LPIN1Q14693 890 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 RNPS1Q15287 305 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 PRTGQ2VWP7 1150 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 EDRF1Q3B7T1 1238 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 GPATCH4Q5T3I0 446 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 FAM180BQ6P0A1 224 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 COLCA1Q6ZS62 124 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 CAMK1DQ8IU85 385 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 TMEM199Q8N511 208 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 C7orf57Q8NEG2 295 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 METTL6Q8TCB7 284 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 KCNG4Q8TDN1 519 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 KLHL29Q96CT2 875 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 ISCUQ9H1K1 167 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 CTNNAL1Q9UBT7 734 aa5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
SHCBP1-206ENST00000567698 KLRF2D3W0D1 207 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 NPIPB11E5RHQ5 1161 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 H0YGN5 161 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 KIF1CO43896 1103 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 ZC3H11AO75152 810 aaKnown RBP eCLIP5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 MMP3P08254 477 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 UBL4AP11441 157 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 SLC2A4P14672 509 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 ARSBP15848 533 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 CAPN3P20807 821 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 CDH12P55289 794 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 YWHAZP63104 245 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 GRIK3Q13003 919 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 HNF4GQ14541 408 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 TAF11Q15544 211 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 TRILQ7L0X0 811 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 MAATS1Q7Z4T9 603 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 TECPR1Q7Z6L1 1165 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 GPAT4Q86UL3 456 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 NOXA1Q86UR1 476 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 DENND6AQ8IWF6 608 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 DHX40Q8IX18 779 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 RNF183Q96D59 192 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 APOLD1Q96LR9 279 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 NLRP4Q96MN2 994 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 PLAC1Q9HBJ0 212 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 DDX4Q9NQI0 724 aaKnown RBP5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 POT1Q9NUX5 634 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 BABAM1Q9NWV8 329 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 ANKRD10Q9NXR5 420 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 TAS2R10Q9NYW0 307 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 NCKIPSDQ9NZQ3 722 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 NDRG3Q9UGV2 375 aa5.03□□□□□ -1.6
SHCBP1-206ENST00000567698 CAPN7Q9Y6W3 813 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms