RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLC35E2BP0CK96 405 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 MPSTP25325 297 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 KPNA2P52292 529 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 NSUN2Q08J23 767 aaKnown RBP eCLIP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CYLC2Q14093 348 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 USP10Q14694 798 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 POTEHQ6S545 545 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 GLB1LQ6UWU2 654 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 PGAM4Q8N0Y7 254 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 PQLC1Q8N2U9 271 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CNTD1Q8N815 330 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CATSPER1Q8NEC5 780 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 ADAM32Q8TC27 787 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 NCSTNQ92542 709 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 DLG3Q92796 817 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 DEFB118Q96PH6 123 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 SHCBP1LQ9BZQ2 653 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 TKTL2Q9H0I9 626 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 ELAC1Q9H777 363 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CDYLQ9Y232 598 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 ACOT9Q9Y305 439 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 B3GAT3O94766 335 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 JCHAINP01591 159 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 AMHP03971 560 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 CHRNGP07510 517 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 USP17L7P0C7H9 530 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 ODC1P11926 461 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 PEX2P28328 305 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 ERFP50548 548 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 SH3BGRP55822 239 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 SATB1Q01826 763 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 TRIP10Q15642 601 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 TCHHL1Q5QJ38 904 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 THEMIS2Q5TEJ8 643 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 LRRC8EQ6NSJ5 796 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 BNC2Q6ZN30 1099 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 GPRIN1Q7Z2K8 1008 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 DSELQ8IZU8 1212 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 ACVR1CQ8NER5 493 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 CPSF2Q9P2I0 782 aaKnown RBP16.96■□□□□ 0.31
CMTM3-213ENST00000566756 DSEQ9UL01 958 aa16.96■□□□□ 0.31
CMTM3-213ENST00000566756 TANC1Q9C0D5 1861 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 TK2O00142 265 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 DENRO43583 198 aaKnown RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 SORBS2O94875 1100 aaKnown RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 ZCCHC18P0CG32 403 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 CCL5P13501 91 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 PCSK1P29120 753 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 HOXC13P31276 330 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 NUDT2P50583 147 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 AQP4P55087 323 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 DNAJB13P59910 316 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 RAB10P61026 200 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 LIN52Q52LA3 116 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 PIGGQ5H8A4 983 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 LPCAT4Q643R3 524 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 SNX32Q86XE0 403 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 CENPLQ8N0S6 344 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 ICA1LQ8NDH6 482 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 MAELQ96JY0 434 aaKnown RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 IL12RB2Q99665 862 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 TBL1YQ9BQ87 522 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 NDUFA13Q9P0J0 144 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 RUVBL2Q9Y230 463 aaKnown RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 INPP5FQ9Y2H2 1132 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 A0A087X1B8 175 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 MYBPHLA2RUH7 354 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 NBNO60934 754 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 IGLV3-25P01717 112 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 AHSGP02765 367 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 DSC1Q08554 894 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 EIF4EBP2Q13542 120 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 GPNMBQ14956 572 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 ZNF423Q2M1K9 1284 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 FSTL5Q8N475 847 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-213ENST00000566756 SUSD3Q96L08 255 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 ACBD6Q9BR61 282 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 RNF208Q9H0X6 261 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 EPB41L1Q9H4G0 881 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 Q9H521 79 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 PIDD1Q9HB75 910 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
CMTM3-213ENST00000566756 TRPC5OSA6NMA1 111 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 TMEM189-UBE2V1I3L0A0 370 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 FGF10O15520 208 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 ZMPSTE24O75844 475 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 CAPNS1P04632 268 aa16.94■□□□□ 0.3
CMTM3-213ENST00000566756 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 HSPA1AP0DMV8 641 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 HSPA1BP0DMV9 641 aaKnown RBP16.94■□□□□ 0.3
CMTM3-213ENST00000566756 TPH1P17752 444 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms