RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 SNX31Q8N9S9 440 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 BHLHE22Q8NFJ8 381 aaPredicted RBP11.71□□□□□ -0.54
CDH1-210ENST00000566612 DDI1Q8WTU0 396 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 PAAF1Q9BRP4 392 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 CRLS1Q9UJA2 301 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 PSMD12O00232 456 aaPredicted RBP11.71□□□□□ -0.54
CDH1-210ENST00000566612 PFKMP08237 780 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 FGFR3P22607 806 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 AKT1P31749 480 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 INSCQ1MX18 579 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.54
CDH1-210ENST00000566612 SLC22A9Q8IVM8 553 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 FBXO39Q8N4B4 442 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 WDR60Q8WVS4 1066 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 SLC9A7Q96T83 725 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 NPAS2Q99743 824 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 ACBD6Q9BR61 282 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 GID8Q9NWU2 228 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 PRKAG3Q9UGI9 489 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 RREB1Q92766 1687 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.54
CDH1-210ENST00000566612 BTN3A1O00481 513 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 PEX11AO75192 247 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 KCNE1P15382 129 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 NFKBIAP25963 317 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 GCAP28676 217 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 IDH3AP50213 366 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 TAS2R39P59534 338 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 BRMS1LQ5PSV4 323 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 FSTL5Q8N475 847 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 PTGR2Q8N8N7 351 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 TRPC4APQ8TEL6 797 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 YY1AP1Q9H869 796 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 VWA7Q9Y334 891 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 ABLIM1O14639 778 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 PEX1O43933 1283 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 TLR5O60602 858 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 DLDP09622 509 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 ZBTB17Q13105 803 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 NRF1Q16656 503 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 GDF6Q6KF10 455 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 IRGCQ6NXR0 463 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 DENND1CQ8IV53 801 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 KBTBD7Q8WVZ9 684 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 DRC3Q9H069 523 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 TAS2R13Q9NYV9 303 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 RGS17Q9UGC6 210 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 LSM7Q9UK45 103 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 ZMYND8Q9ULU4 1186 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 DLEC1Q9Y238 1755 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 TBX10O75333 385 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 WFS1O76024 890 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 IL4RP24394 825 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 ABL2P42684 1182 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 NFYCQ13952 458 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 PLEKHG4Q58EX7 1191 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 TMEM198Q66K66 360 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 PIWIL4Q7Z3Z4 852 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 ABTB1Q969K4 478 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 MRPL57Q9BQC6 102 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 CCDC90BQ9GZT6 254 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 UBA2Q9UBT2 640 aaPredicted RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
CDH1-210ENST00000566612 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
CDH1-210ENST00000566612 H7C4K7 107 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 GPR32O75388 356 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 AMHP03971 560 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 RPLP2P05387 115 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 PBX3P40426 434 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 RGS4P49798 205 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 GPRIN1Q7Z2K8 1008 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 SEPT8Q92599 483 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 TBATAQ96M53 351 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 CCT7Q99832 543 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 SAC3D1A6NKF1 404 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 PFDN1O60925 122 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 STAU1O95793 577 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 ATP5BP06576 529 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 ATP5C1P36542 298 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 ARHGAP36Q6ZRI8 547 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 PSMG2Q969U7 264 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 TRIM54Q9BYV2 358 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 TM6SF2Q9BZW4 377 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 BTRCQ9Y297 605 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms