RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 TPX2Q9ULW0 747 aaKnown RBP26.47■■□□□ 1.83
NME3-209ENST00000566600 SHROOM3Q8TF72 1996 aa26.47■■□□□ 1.83
NME3-209ENST00000566600 METTL12A8MUP2 240 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 MEI4A8MW99 385 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 PLRG1O43660 514 aaKnown RBP26.46■■□□□ 1.83
NME3-209ENST00000566600 LRP3O75074 770 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 TJP3O95049 919 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 CCNB1P14635 433 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 PTGER3P43115 390 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 SCNN1BP51168 640 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 NEK3P51956 506 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 CREB5Q02930 508 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 PIP5KL1Q5T9C9 394 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 AGBL4Q5VU57 503 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 FBXL19Q6PCT2 694 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 ARMCX6Q7L4S7 300 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 SLC41A1Q8IVJ1 513 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 ZNF641Q96N77 438 aaPredicted RBP26.46■■□□□ 1.83
NME3-209ENST00000566600 KLHL32Q96NJ5 620 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 LGMNQ99538 433 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 HINFPQ9BQA5 517 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 MGME1Q9BQP7 344 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 ATP13A3Q9H7F0 1226 aa26.46■■□□□ 1.83
NME3-209ENST00000566600 CEP192Q8TEP8 1941 aa26.45■■□□□ 1.83
NME3-209ENST00000566600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.45■■□□□ 1.82
NME3-209ENST00000566600 BCLAF3A2AJT9 711 aaKnown RBP26.45■■□□□ 1.82
NME3-209ENST00000566600 APOC4-APOC2K7ER74 178 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 PLK4O00444 970 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 INSIG1O15503 277 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 APOC2P02655 101 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 CES1P23141 567 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 SERPINA4P29622 427 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 RGRP47804 291 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 ADCY2Q08462 1091 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 AP1B1Q10567 949 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 RPS6KA1Q15418 735 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 MEI1Q5TIA1 1274 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 RAB7BQ96AH8 199 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 NUDCD1Q96RS6 583 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 ARRDC1-AS1Q9H2J1 176 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 C6orf106Q9H6K1 298 aaPredicted RBP26.45■■□□□ 1.82
NME3-209ENST00000566600 DKK3Q9UBP4 350 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 MYO15AQ9UKN7 3530 aa26.45■■□□□ 1.82
NME3-209ENST00000566600 GPR179Q6PRD1 2367 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3DA0A087WVF3 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3IA0A087WXS9 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3EA0A087X179 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3KA0A087X1G2 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3FA6NER0 549 aaPredicted RBP26.44■■□□□ 1.82
NME3-209ENST00000566600 FAM47DPA6NHR8 397 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 C16orf96A6NNT2 1141 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3LB9A6J9 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 MUSKO15146 869 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3HP0C7X1 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 PECAM1P16284 738 aaPredicted RBP26.44■■□□□ 1.82
NME3-209ENST00000566600 HOXD12P35452 270 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 DCAF12L1Q5VU92 463 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 KIAA0895LQ68EN5 471 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3GQ6DHY5 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3CQ6IPX1 549 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 NCEH1Q6PIU2 408 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 SYT12Q8IV01 421 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 TBC1D3Q8IZP1 549 aaPredicted RBP26.44■■□□□ 1.82
NME3-209ENST00000566600 TFB1MQ8WVM0 346 aaKnown RBP26.44■■□□□ 1.82
NME3-209ENST00000566600 VOPP1Q96AW1 172 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 POLR1EQ9GZS1 481 aaKnown RBP26.44■■□□□ 1.82
NME3-209ENST00000566600 SUV39H2Q9H5I1 410 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 PREBQ9HCU5 417 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 NT5MQ9NPB1 228 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 SCUBE2Q9NQ36 999 aa26.44■■□□□ 1.82
NME3-209ENST00000566600 RBM22Q9NW64 420 aaKnown RBP eCLIP26.44■■□□□ 1.82
NME3-209ENST00000566600 OTOGLQ3ZCN5 2332 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 RNF103O00237 685 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 ADRB3P13945 408 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 CR2P20023 1033 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 CCR5P51681 352 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 SUOXP51687 545 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 IFI35P80217 286 aaPredicted RBP26.43■■□□□ 1.82
NME3-209ENST00000566600 BCL2L1Q07817 233 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 CFAP58Q5T655 872 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 NEK5Q6P3R8 708 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 PARS2Q7L3T8 475 aaKnown RBP26.43■■□□□ 1.82
NME3-209ENST00000566600 RABEPKQ7Z6M1 372 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 RGL4Q8IZJ4 473 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 PGBD5Q8N414 524 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 GPR161Q8N6U8 529 aaKnown RBP26.43■■□□□ 1.82
NME3-209ENST00000566600 PIGKQ92643 395 aa26.43■■□□□ 1.82
NME3-209ENST00000566600 SAE1Q9UBE0 346 aaPredicted RBP26.43■■□□□ 1.82
NME3-209ENST00000566600 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.43■■□□□ 1.82
NME3-209ENST00000566600 SDK1Q7Z5N4 2213 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 WDR87Q6ZQQ6 2873 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 GOLGA6L9A6NEM1 432 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 HACD1B0YJ81 288 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 MTSS1O43312 755 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 FSBPO95073 299 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 ITPKAP23677 461 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 MPLP40238 635 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 ITKQ08881 620 aa26.42■■□□□ 1.82
NME3-209ENST00000566600 ZNF211Q13398 564 aaPredicted RBP26.42■■□□□ 1.82
NME3-209ENST00000566600 XRCC4Q13426 336 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms