RNA–Protein interactions for RNA: ENST00000565964.5

COQ9-208, Transcript of coenzyme Q9, human

TSL 3

Gene COQ9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COQ9-208	ENST00000565964	NRL	P54845	237 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	RPS14	P62263	151 aa	Known RBP	21.31	■■□□□ 1
COQ9-208	ENST00000565964	SNX1	Q13596	522 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	P3H1	Q32P28	736 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	ANKRD20A2	Q5SQ80	823 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	ANKRD20A1	Q5TYW2	823 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	ANKRD20A3	Q5VUR7	823 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	PRPF39	Q86UA1	669 aa	Known RBP	21.31	■■□□□ 1
COQ9-208	ENST00000565964	SPATA4	Q8NEY3	305 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	FCRL5	Q96RD9	977 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	NOD2	Q9HC29	1040 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	IL36A	Q9UHA7	158 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	SARDH	Q9UL12	918 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	FARP1	Q9Y4F1	1045 aa	Predicted RBP	21.31	■■□□□ 1
COQ9-208	ENST00000565964	VPS13A	Q96RL7	3174 aa		21.31	■■□□□ 1
COQ9-208	ENST00000565964	CCDC163	A0A0D9SF12	145 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	HTRA2	O43464	458 aa	Predicted RBP	21.3	■■□□□ 1
COQ9-208	ENST00000565964	GJB3	O75712	270 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	PRNP	P04156	253 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	GABRG2	P18507	467 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	SCNN1B	P51168	640 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	MAX	P61244	160 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	LMNB2	Q03252	620 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	DSG4	Q86SJ6	1040 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	TMPRSS6	Q8IU80	811 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	C1orf210	Q8IVY1	113 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	ZNF592	Q92610	1267 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	NELL1	Q92832	810 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	ECHDC3	Q96DC8	303 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	EXOC2	Q96KP1	924 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	ZNF641	Q96N77	438 aa	Predicted RBP	21.3	■■□□□ 1
COQ9-208	ENST00000565964	AGAP3	Q96P47	875 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	SEMA3C	Q99985	751 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	GORASP1	Q9BQQ3	440 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	OSBPL1A	Q9BXW6	950 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	CEP41	Q9BYV8	373 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	SEPT10	Q9P0V9	454 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	DKK3	Q9UBP4	350 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	FEZ2	Q9UHY8	353 aa	Predicted RBP	21.3	■■□□□ 1
COQ9-208	ENST00000565964	EVL	Q9UI08	416 aa	Predicted RBP	21.3	■■□□□ 1
COQ9-208	ENST00000565964	SCML1	Q9UN30	329 aa		21.3	■■□□□ 1
COQ9-208	ENST00000565964	WDR87	Q6ZQQ6	2873 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	21.29	■■□□□ 1
COQ9-208	ENST00000565964	TCRBV21S2A2	A0A5A6	115 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	TSPAN11	A1L157	253 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	STK10	O94804	968 aa	Known RBP	21.29	■■□□□ 1
COQ9-208	ENST00000565964	APBB3	O95704	486 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	IGLV3-19	P01714	112 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	NDUFV2	P19404	249 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	SKOR1	P84550	965 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	RAD51	Q06609	339 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	FAM182A	Q5T1J6	154 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	ZNF776	Q68DI1	518 aa	Predicted RBP	21.29	■■□□□ 1
COQ9-208	ENST00000565964	CCDC137	Q6PK04	289 aa	Known RBP	21.29	■■□□□ 1
COQ9-208	ENST00000565964	PID1	Q7Z2X4	250 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	GBA3	Q9H227	469 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	FBXO4	Q9UKT5	387 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	CFAP54	Q96N23	3096 aa		21.29	■■□□□ 1
COQ9-208	ENST00000565964	ATG2B	Q96BY7	2078 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	FZD6	O60353	706 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	LEFTY1	O75610	366 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	GK	P32189	559 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	DSC2	Q02487	901 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	CST6	Q15828	149 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	PARP6	Q2NL67	630 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	ARSI	Q5FYB1	569 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	C4orf22	Q6V702	233 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	MMAA	Q8IVH4	418 aa	Known RBP	21.28	■■□□□ 1
COQ9-208	ENST00000565964	GLIS1	Q8NBF1	620 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	TSTD1	Q8NFU3	115 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	PIP4K2C	Q8TBX8	421 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	CCDC110	Q8TBZ0	833 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	RUNDC3B	Q96NL0	473 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	L2HGDH	Q9H9P8	463 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	ITM2C	Q9NQX7	267 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	VPS45	Q9NRW7	570 aa		21.28	■■□□□ 1
COQ9-208	ENST00000565964	SPATA6	Q9NWH7	488 aa	Predicted RBP	21.28	■■□□□ 1
COQ9-208	ENST00000565964	KLHL8	Q9P2G9	620 aa	Predicted RBP	21.28	■■□□□ 1
COQ9-208	ENST00000565964	TTC24	A2A3L6	582 aa	Predicted RBP	21.27	■■□□□ 1
COQ9-208	ENST00000565964	C10orf142	B7Z368	130 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	RNASEH1	O60930	286 aa	Known RBP	21.27	■■□□□ 1
COQ9-208	ENST00000565964	SOCS5	O75159	536 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	ALDH1A2	O94788	518 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	ADH1B	P00325	375 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	NFKB1	P19838	968 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	C5AR1	P21730	350 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	PTGIR	P43119	386 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	CKAP4	Q07065	602 aa	Known RBP	21.27	■■□□□ 1
COQ9-208	ENST00000565964	FAM46C	Q5VWP2	391 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	ITPRIPL1	Q6GPH6	555 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	GDPD4	Q6W3E5	623 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	MDGA1	Q8NFP4	955 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	OR6K2	Q8NGY2	324 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	SIPA1	Q96FS4	1042 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	HDAC8	Q9BY41	377 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	DDX47	Q9H0S4	455 aa	Known RBP	21.27	■■□□□ 1
COQ9-208	ENST00000565964	SUV39H2	Q9H5I1	410 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	ATP13A3	Q9H7F0	1226 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	SCUBE2	Q9NQ36	999 aa		21.27	■■□□□ 1
COQ9-208	ENST00000565964	USP36	Q9P275	1121 aa	Known RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms